Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1755 ATGGCACCAACGAGGAAATCTAGAAGCGTGAATAAGCGGATTTCAAGTTCAAATGACAATTCCCCTGAGAAAGATGGAGTTAATTCAAATAAAAACAAGCAACGAAAGAAAAAGTTGACTGATAAATTGGGATCTCAGTGGAGCAAGGAGGAACTAGAGCGATTTTATGAAGCATATAGGAAGTATGGGAAAGACTGGAAGAAGGTGGCTGCTGTTGTACGTAATAGATCCACTGAAATGGTAGAAGCTCTTTACAATATGAATCGGGCATACCTCTCTCTACCAGAGGGGACGGCTTCTGTTGTTGGCCTCGTAGCAATGATGACAGATCACTACAATGTGATGGAAGGGAGTGATAGTGAAAGGGAGAGCAATGATGCACCGGGATCTCGAAAACCTGTAAAACGAAAGCGTGAAAAAGTTCAGCTTAGTGTCTCTAAAGATCCGTCTCATTCAATTGCTTCTAATGATGATTGCCTCTCTATATTAAAGAAGAGACGCTTTGATGGTATCCAGCTTCAGCCTCATGCTGTTGGTAAAAGGACTCCACGTGTCCCAGTTTCCTATTCTTATAAGAAAGATGATACAGAAAGTTATGTTTCACCTTATAGAAGAAGCCTGAAGTCGACTATTGATGCTAATGAAGATGAAGTTGCACATGTTGTAGCTTTGGCATTAACTGAGGCTGCACAAAGAGGAGGCTCTCCCCAAGTTTCTCAAACACCATCTAGAAGAGTAGAGCAAAAATCCTCTCCCATCATCCAGAGCCGGGAAAGAAAGCGCCAAATGTCAGAGACAGCTCGTGCCAAGTTTCATGATTCTGTGAATGAAGAGTTCTTGGAAGGTAGTATAGAAAGCAGGGGAGCTGAAAATGGAGAATATGCAAGAGATAATAGTTCATTGATGGATACAGAAGGCATAGGCACTGTTGAAGTTCTTCAGAAGGGGGGGAAATTTTATAGAAAGAGAGAGAGAGTGGAAAAAGTTGGAAATCATGAACTTGATGATGGTGGGGAAGCATGTAGCGGCACTGAAGAAGGACTTAGTTTTAGTTCACTAAAGGAAAAGGTTGATAATGAGGTTACTAATGAAAAACTAGAAAAATTCTCTCCAAAAAGTCAGAGGAAAAGAAACAAGAAACTTTTCTTTGGAGATGAAACCCCTGCCTTGAATGCATTGCAAACTTTGGCTGATCTGTCTCTAATGATGCCAATATCTACAAAGGAATCTGAATCATCTATCCAGTTGGAGGGTGAAAAAATGGTTGCTGATAAGGATAATAAGTCTGCTTTACTTGAAGCAACATCAAGCCATAAGAGACATAAACTTAAATACAGTCTGGTCCCTGACATTGAGGTTTCAAGCTCCAAAAAGTCTAAGATTGGAAAGGAATCAACAAAGGATACTAATGCTCTTTCTGAATCAAAAGAGAAACTTCCTTTTGTGGATACAACATGGAAAAGAAAGCGGAAGTCTATGGGTTCAAAGGTTGCAAATCCAAAGCTTGATTCTTATCCAAATGGTCCCTTGAAAGATGAGGCCTTTGATGATGATAACAAACCAGTGGTTAAAGGAAAACATGCTGATCAGGTTTTTACCCTATCAAAGCAATTGAAGACAGTTAAATCATCAGAGAGTTCCTTATGCAGTGATCAGAAAGATTTGACAGTATCAACTGCAGAAGTTCCACTTTTGAATGAAGTTAGTTTACCAACTAAACGAAGTAGACGTAAGATGATTTTACAGAGAACTTCCCTGCCTAAGGAAAAGTCTTCTAATTACATATTGAAACGTCAACCTAACAAGTACTCTACCCTAAAGGAAAAGCTTTCTAGTTGCTTGTCATCTAATACAGTTCGCAGGTGGTTTATTTTTGAATGGTTTTATAGTGCAATTGATTATCCATGGTTTGCCAAAAGGGAATTCATGGAGTACTTAAATCATGTTGGACTAGGGAATATCCCAAGGTTAACTCGTGTTGAGTGGAGTGTCATAAAAAGTTCCCTTGGCAAACCCCGCAGGTTTTCTGAACACTTTCTTCATGAAGAAAGGCAAAAACTTGAACAGTATCGGGAATCAGTGAGGAAACATTACACTGATCTGCGGACTGGTATTAGGGATGGACTTCCAACAGATTTAGCCAAACCATTATATGTTGGACAACGTGTAATTGCTCTTCATCCTAAAACAAGAGAGATTCATGATGGTAGTGTGCTTACTGTTGACTATGACAAGTGCAGGATTCAATTTGACCGTCCTGAATTAGGTGTTGAATTTGTAATGGACATTGATTGCATGCCTTTGAATCCATTAGATAATATGCCAGAAGCTCTGAGGAGGCATATTGGTTCCCAAAAAGCCTCTTTCGTGAATAAAGAGCCACAAATTAATGGAAATTCAAATTTTGGGGGGTGCGAAATGCATTCCTTACCTGTGAAGGCCCAGGCAAAGGTTGCTACCGTTGATAACCTCTGTGCACAAGCAGGTTGTGCTCAACCGTGTAAAGTGACAGACCATCAAGCTAAGGAAGCTGATATACATGCACTTTCTGAACTAAACCGTACTTTAGATAAAAAGGAGACATTGTTGATGGAGCTTCGAAGTGCAAATAGCGGCATATTGGAAAACCAAAATGGCATAGAATGCTTAAAAGATTCTGAGGTTTTCAAGAAGCATTATGCCACGGTTTCTGATGCTATGCTACAACTGAGGCAACGGAATACTTACAGAGGAGACTCTCTGCCACCCTGGATGAAGCCGCAAGCAAGTTTCAATGTTCATGATCTTCCCAATATGTTGGATAGTTCTGTAACACAGGAGTTAGGGTCAACTGTTGTTCAAGTTATTAAAGGTTCCAGGCTAACGGCACATGCAATGGTAGATGCTGCATTTCAGGCATTGTCTTTGACAAAGGAAGGTGAAGATGCTTTCATGAAGATTGGGCAAGCATTGGATTCTATAAATCATCAGCAGTTGGCCTCAAAGTCTAGGTTACCTGTGGTCAGGTCTCAAGAGCAAGTGAATGCGAATGGCAGTTTTCATCATCTTAATCATTCAACTAGTGGTTTATTAGAGCCTATACTTAATGATCCATCGGTTCCAAAACTACACAATTATTCTGACAAATTTGATACTGAACTTCCATCAAATCTTATTACTTCATGTGTTGCTACATTAATCATGATTCAGACTTGTACTGAACGGCAATACCCGCCAGCTGATGTAGCTCAGATATTAGATTCTGCTGTTACCAGCCTTCATCCATGCTGTCCTCAAAACCTTCCCATTTACAGAGAAATTCAAATGTGCATGGGAAGAATCAAAACCCAGATGTTAGCTCTCATCCCTACTTGA 3354 0.4007 MAPTRKSRSVNKRISSSNDNSPEKDGVNSNKNKQRKKKLTDKLGSQWSKEELERFYEAYRKYGKDWKKVAAVVRNRSTEMVEALYNMNRAYLSLPEGTASVVGLVAMMTDHYNVMEGSDSERESNDAPGSRKPVKRKREKVQLSVSKDPSHSIASNDDCLSILKKRRFDGIQLQPHAVGKRTPRVPVSYSYKKDDTESYVSPYRRSLKSTIDANEDEVAHVVALALTEAAQRGGSPQVSQTPSRRVEQKSSPIIQSRERKRQMSETARAKFHDSVNEEFLEGSIESRGAENGEYARDNSSLMDTEGIGTVEVLQKGGKFYRKRERVEKVGNHELDDGGEACSGTEEGLSFSSLKEKVDNEVTNEKLEKFSPKSQRKRNKKLFFGDETPALNALQTLADLSLMMPISTKESESSIQLEGEKMVADKDNKSALLEATSSHKRHKLKYSLVPDIEVSSSKKSKIGKESTKDTNALSESKEKLPFVDTTWKRKRKSMGSKVANPKLDSYPNGPLKDEAFDDDNKPVVKGKHADQVFTLSKQLKTVKSSESSLCSDQKDLTVSTAEVPLLNEVSLPTKRSRRKMILQRTSLPKEKSSNYILKRQPNKYSTLKEKLSSCLSSNTVRRWFIFEWFYSAIDYPWFAKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLHEERQKLEQYRESVRKHYTDLRTGIRDGLPTDLAKPLYVGQRVIALHPKTREIHDGSVLTVDYDKCRIQFDRPELGVEFVMDIDCMPLNPLDNMPEALRRHIGSQKASFVNKEPQINGNSNFGGCEMHSLPVKAQAKVATVDNLCAQAGCAQPCKVTDHQAKEADIHALSELNRTLDKKETLLMELRSANSGILENQNGIECLKDSEVFKKHYATVSDAMLQLRQRNTYRGDSLPPWMKPQASFNVHDLPNMLDSSVTQELGSTVVQVIKGSRLTAHAMVDAAFQALSLTKEGEDAFMKIGQALDSINHQQLASKSRLPVVRSQEQVNANGSFHHLNHSTSGLLEPILNDPSVPKLHNYSDKFDTELPSNLITSCVATLIMIQTCTERQYPPADVAQILDSAVTSLHPCCPQNLPIYREIQMCMGRIKTQMLALIPT 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1755 1117 MobiDBLite consensus disorder prediction 115 145 - -
Aed8g1755 1117 ProSiteProfiles SANT domain profile. 42 79 IPR017884 -
Aed8g1755 1117 MobiDBLite consensus disorder prediction 230 269 - -
Aed8g1755 1117 MobiDBLite consensus disorder prediction 1 25 - -
Aed8g1755 1117 MobiDBLite consensus disorder prediction 232 250 - -
Aed8g1755 1117 PANTHER LIN-9 1 1117 IPR010561 GO:0006351|GO:0017053
Aed8g1755 1117 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 1 1117 IPR028306 -
Aed8g1755 1117 MobiDBLite consensus disorder prediction 26 44 - -
Aed8g1755 1117 MobiDBLite consensus disorder prediction 115 153 - -
Aed8g1755 1117 Gene3D - 2 99 - -
Aed8g1755 1117 MobiDBLite consensus disorder prediction 489 522 - -
Aed8g1755 1117 ProSiteProfiles Myb-like domain profile. 45 86 IPR001005 -
Aed8g1755 1117 SMART DIRP_2 628 729 IPR033471 -
Aed8g1755 1117 CDD SANT 47 88 IPR001005 -
Aed8g1755 1117 SUPERFAMILY Homeodomain-like 41 90 IPR009057 -
Aed8g1755 1117 Pfam DIRP 627 728 IPR033471 -
Aed8g1755 1117 MobiDBLite consensus disorder prediction 251 269 - -
Aed8g1755 1117 MobiDBLite consensus disorder prediction 1 44 - -
Aed8g1755 1117 SMART sant 43 91 IPR001005 -
Aed8g1755 1117 Coils Coil 849 869 - -
Aed8g1755 1117 Pfam Myb-like DNA-binding domain 45 82 IPR001005 -
Aed8g1755 1117 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 41 81 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1755 Aed-Chr8 22520969 22534160 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed8g1755 DIRP 4.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1755 - - gmx:100789533 1992.62