Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1751 ATGGATCAAGATGATCAGGAACAAGATAGAGCGTTGCCGATTGCAAATGTGGGTCGAATCATGAAGCAGATTCTTCCCCCAAGTGCAAAGATCTCCAAAGAAGGGAAGCAAGTAATGCAAGAGTGTGTGACAGAGTTCATAAGTTTTGTAACTGGTGAGGCTTCTGACAAGTGTCACAAGGAGAATCGCAAAACCGTTAATGGGGATGACATCTGTTGGGCTCTTAGCTCCTTAGGGTTTGACAACTATGCTGAGGCCATTGGAATCTACTTGCATAAATACAGGCTAGCTGAAAGGGACAAAATCATTCACAACAAAAAGTACTATCAAGAACAAGGTAATTCAGCAGCAACAAAAAGTGCTCCACTACCACCACTTCTGTCTAGGGTTACTCATCACAAGGTTGAAAACCCTCTTCCTCCTCCTCCTCCTCCTACTACTAATCAATCTGGATGA 456 0.4342 MDQDDQEQDRALPIANVGRIMKQILPPSAKISKEGKQVMQECVTEFISFVTGEASDKCHKENRKTVNGDDICWALSSLGFDNYAEAIGIYLHKYRLAERDKIIHNKKYYQEQGNSAATKSAPLPPLLSRVTHHKVENPLPPPPPPTTNQSG 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1751 151 ProSitePatterns NF-YB/HAP3 subunit signature. 42 58 IPR003956 GO:0005634|GO:0006355|GO:0043565
Aed8g1751 151 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 11 75 IPR003958 -
Aed8g1751 151 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-4 5 116 - -
Aed8g1751 151 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 5 116 IPR027113 GO:0001228|GO:0006355|GO:0016602
Aed8g1751 151 SUPERFAMILY Histone-fold 8 109 IPR009072 GO:0046982
Aed8g1751 151 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Aed8g1751 151 PRINTS CCAAT-binding transcription factor subunit A signature 39 57 - -
Aed8g1751 151 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Aed8g1751 151 MobiDBLite consensus disorder prediction 136 151 - -
Aed8g1751 151 MobiDBLite consensus disorder prediction 113 151 - -
Aed8g1751 151 Gene3D Histone, subunit A 1 123 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1751 Aed-Chr8 22488271 22488726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1751 7 106 CCAAT-HAP3 Transcription Factor Family AT1G09030 75.000 3.30e-55 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Aed8g1751 CBFD_NFYB_HMF 4.4e-25 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1751 K08065 - gmx:100815151 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1751 8 22488271 22488726 Aed8g1751 8 22488271 22488726 ECH