Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1747 ATGTCAAACATCACAAGCTGTGATAGTGGGAGCTTCTCTACAGAAGATGCAACAGTTAAACTACAACAACAACAACAACAATCTGAGATGCTTGGTCAGTTCCATAGTCCACATTCTCATACTTCAACTACAACAACAAATAACAGCAATGGTAATTCCAACACAAATTCACAACAACCACCCGTTAAGAAGAAAAGGAGCCTACCAGGAAATCCAGATCCAAGTGCTGAAGTGATAGCTCTATCACCAACCACACTAATGGCGACAAACAGGTTCATATGTGAAATATGCAACAAAGGGTTTCAAAGAGACCAAAACCTACAGTTGCACCGGCGAGGGCACAACTTGCCGTGGAAGCTGAAGCAGAGAACGAGCACGGAAGTTAGAAAGAGGGTTTACGTGTGTCCAGAAGCGTCGTGTGTTCACCACAACCCAGCGAGAGCACTCGGAGATCTGACTGGCATAAAAAAGCACTTCTGCAGAAAGCACGGCGAGAAGAAGTGGAAATGTGATAAGTGCTCTAAGAAATACGCTGTTCAGTCTGACTGGAAAGCCCACTCTAAAATATGTGGTACAAGGGAATACAAATGTGACTGTGGTACCATCTTTTCCAGAAGAGACAGCTTCATTACACACAGAGCTTTCTGTGACGCGCTAGCTGAGGAGAACAACAAAGCTAGCAGCGAAGGAGTACATGAATTGGCAAAGATAGGTCCAATTAATAACTTGCAAAGCCAACAACAAATGATCCCAAACCTGGTTTCATCGTTACCAATGATCAACACCAACAACATTGTACTTCCCAACACCTCGGAGTTCAACCATGTTAGTGATCACAAGCACCCACACGAGCTCATGCCAATGCCAATGCCAGCACAAAAACCCTTCAACACCAACAACATTGCTGCTGCGGCAGGAAGCACAGTGTTCACGAGAGGCCTCATCTCATCAACCACTTCTCCATCTCTTCAACTAAGCTCAAACATGTTCGAGCTTGCTGCAGCAGGGTCGCCACACATGTCAGCCACGGCGCTGTTGCAGAAAGCTGCACAAATGGGAGCAACAGTGACGACAGAGAAAAGTGCTTTTGCAACAAACATGGCACCGCCATCGTTTGGAGTGCTTCAACAGCATCAGCATCAACAACCACTGAATGGATCACAATCCTTCATGAACCAATTATACATGCACAGTCATGGCCAACAACAACAACAACAACAGGAGCAGTATGATAATAGTTTCGGTGGTGCAAATGGGATGAACGGTGTGGACATGTTCAATGCTATTTTGGACCAGAGCAAGGCTTTGTCGAAGATCATAGAGCAGAACAATAATAGAAGCAGCGGTAGTAGTGGAGGAGGAGGAGCAACAACAAATGGAGGTAATAATTCGAGTAGTGGTATTAATAACGTTGTTGGTGGAAGCAAAGGAAGTGGCAGTGGGGATGTTATGACTCTGGACTTCTTGGGAATAGGTGGTGGTGGGGGTGCGCATGGAAATTTCTATGGTGGTGGTGGTGCTCAACAACAACAACAACAACAACAACAAGGGGAAAGTGGTGCAGCGGATGAGGTTTGGAGAAACTGGTCTAGTAAGAACGCAGGGTTTGAATCGTTTTCAGCAACCAGCAGCATTTGA 1638 0.456 MSNITSCDSGSFSTEDATVKLQQQQQQSEMLGQFHSPHSHTSTTTTNNSNGNSNTNSQQPPVKKKRSLPGNPDPSAEVIALSPTTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSTEVRKRVYVCPEASCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTIFSRRDSFITHRAFCDALAEENNKASSEGVHELAKIGPINNLQSQQQMIPNLVSSLPMINTNNIVLPNTSEFNHVSDHKHPHELMPMPMPAQKPFNTNNIAAAAGSTVFTRGLISSTTSPSLQLSSNMFELAAAGSPHMSATALLQKAAQMGATVTTEKSAFATNMAPPSFGVLQQHQHQQPLNGSQSFMNQLYMHSHGQQQQQQQEQYDNSFGGANGMNGVDMFNAILDQSKALSKIIEQNNNRSSGSSGGGGATTNGGNNSSSGINNVVGGSKGSGSGDVMTLDFLGIGGGGGAHGNFYGGGGAQQQQQQQQQGESGAADEVWRNWSSKNAGFESFSATSSI 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1747 545 MobiDBLite consensus disorder prediction 504 521 - -
Aed8g1747 545 Gene3D Classic Zinc Finger 71 140 - -
Aed8g1747 545 MobiDBLite consensus disorder prediction 531 545 - -
Aed8g1747 545 SUPERFAMILY beta-beta-alpha zinc fingers 91 188 IPR036236 -
Aed8g1747 545 MobiDBLite consensus disorder prediction 397 417 - -
Aed8g1747 545 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 37 516 - -
Aed8g1747 545 MobiDBLite consensus disorder prediction 500 545 - -
Aed8g1747 545 MobiDBLite consensus disorder prediction 1 77 - -
Aed8g1747 545 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 37 516 - -
Aed8g1747 545 MobiDBLite consensus disorder prediction 397 416 - -
Aed8g1747 545 Gene3D Classic Zinc Finger 146 226 - -
Aed8g1747 545 ProSiteProfiles Zinc finger C2H2 type domain profile. 92 114 IPR013087 -
Aed8g1747 545 SMART c2h2final6 168 188 IPR013087 -
Aed8g1747 545 SMART c2h2final6 92 114 IPR013087 -
Aed8g1747 545 SMART c2h2final6 133 163 IPR013087 -
Aed8g1747 545 MobiDBLite consensus disorder prediction 1 64 - -
Aed8g1747 545 MobiDBLite consensus disorder prediction 443 474 - -
Aed8g1747 545 Pfam Zinc-finger double-stranded RNA-binding 92 114 IPR022755 -
Aed8g1747 545 ProSitePatterns Zinc finger C2H2 type domain signature. 94 114 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1747 Aed-Chr8 22453646 22458290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1747 41 354 IDZ Gene Family AT3G50700 54.441 8.94e-115 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed8g1747 zf-C2H2_jaz 8.1e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1747 - - gmx:100813556 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1747 8 22453646 22458290 Aed8g1747 8 22453646 22458290 ECH
Aed8g1747 8 22453646 22458290 Aed4g0234 4 1679049 1683910 PCT