Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1730 ATGAGTCGAGGAAGTGCCACTGCCGCCAAGGGCAAGAAGAAGGGAGTGACATTCACCATCGACTGCGCGAAGCCAGTGGAGGACAAGATCATGGACATCGCGTCTCTCGAAAAGTTCCTTCAAGAGAGGATCAAGGTTGGCGGCAAGGCCGGTGCTCTCGGCGACACCATCACCGTCGCACGTGAGAAGACCAAAATCATAGTCACCTCCGACAGCAACTTCTCCAAACGGTACCTCAAGTACCTGACTAAGAAGTACTTGAAGAAGCACAATGTACGGGACTGGCTTAGAGTGATTGCTTCTAACAAAGATAGAAGCATTTATGAATTGAGGTACTTCAACATTGCTGAGAATGAAGGAGAGGAAGAAGATTAA 375 0.488 MSRGSATAAKGKKKGVTFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTITVAREKTKIIVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEED 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1730 124 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 124 - -
Aed8g1730 124 Gene3D - 5 124 IPR038526 -
Aed8g1730 124 PANTHER 60S RIBOSOMAL PROTEIN L22 1 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Aed8g1730 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1730 Aed-Chr8 22327497 22329024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1730 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 84.677 5.13e-67 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1730 K02891 - gmx:100499952 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1730 8 22327497 22329024 Aed8g1730 8 22327497 22329024 ECH
Aed2g2448 2 27384762 27385880 Aed8g1730 8 22327497 22329024 PCT