Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1727 ATGGGGGAAGATGGACAGAAAAACAGGAGAATCGCCATCATTGCCATCTCAACCATCTTCCTAGTGGCTATGGTCTTGGCCGTCACAATTGGTGTCAACTACAGCCTCATCGGTTCCAATGACGATGAAAAAGGAAGCAATGGCCGCGCTGCTACCACCGTGAAAGCGGTGAAAACCCTCTGCAAGCCCACGTATTACCCGAAAGAATGCCAGCAAAGCCTAAACTCAGAAGCCGGGAACACCACGGATCCGAGAGAACTCATTAAAATCGCCTTCAATGTAACCATTAGAGAAATACGCAACGGAGTAAAGAAAACAAATCTGATGCACGAGATCGAGAATGATCCAATGTCCAAGATGGCGATCGACACGTGCTTGCAGCTCATGGATCTCTCCATTTCTGAGTTCAAGAGGTCGCTTGAGAGAATGGGGAAGTTTGATCTCGACAACCTCGACAACATCGTCAACAGCTTGACGGTGTGGCTCAGCGGCGCAATCACGTACCAAGAGACCTGCTTGGATGGCTTCAAGAACTCCACCAACGATGCAGGGAGGAAAATGAAGACCTTGTTAACGAGTACAATGCACATGAGCAGCAATGCTCTCGCCATCATCACAGAGCTTGCAAACACTGTCTCGGAAATGGATCACACCACGATGACCAAGGACCCTCGCCAGCTTCTTCAGGAGGAACATGTTTTCGGTCGCGACGAGGTTATTCCTCCGTGGGTTATGGAGGCTGGTGGTGTTCGTAGACTCCTCCATCAAAGTCAGAACAATAAAGTCAAGGCTAATGTGGTTGTGGCTAAAGATGGTAGTGGGGACTACAAGAGCATCAACAAGGCACTGCAGAAGGTGCCACAGAAAAACCAAAGGCCATTCGTCATCTACATTAAGGAAGGTGTTTACCATGAGTATGTTGAAGTCACTAAGAAAATGTCTCACGTGGTGTTCGTTGGTGATGGTGGCCAGAAGACACGAATCACCGGTAACAAAAACTTCGTAGACGGAGTTAATACTTACAAAACCGCCTCAGCCGCTATTCTTGGAGATTACTTTGTGGCCATCAACATAGGGTTTGAGAACACAGCTGGCGCGGCAAAACATCAAGCAGTGGCAGTGAGGGTGCAAGCAGACAAGTCCATTTTCTTTAAATGCTCAATGGATGGGTATCAAGACACACTCTACGCTCATGCAATGCGTCAGTTCTATCGAGAATGCACCATTTCAGGCACCATAGACTTCGTCTTCGGTGATGCAGTGGCTGTTTTCCAGAAATGCACATTCGTGGTAAGAAAAGCATTAGAAAACCAACAATGCATAGTGACGGCACAAGGTAGAAAAGACAGGCACCAACCGTCAGGAACAGTGTTACAAGGTTGCTCCATTGTGGCAGATAAAAAAGAGAAGCTTGAAAACAAGGTTTACCTGGCACGTCCGTGGAAGAATCACTCGAGGACCATATTCATGGACACATACATTGGGGATTTGATTGAACCCGAAGGGTACATGCCATGGCAAGGACCAACTGGTCTTTCGGGTATGGATAGTTGCTTCTATGCAGAGTACAATAACGCTGGTCCTGGCTCAAACAAATCAAAGCGTGTAAAATGGCGTGGGATCATCAAACTCACTTCCGAATCCGTCACCCGTTACTTACCTTACAAATTTTTTCATGGAGATGATTGGATTAAAATTACCAGGATTCCTTACTCCAAGGCTGTCACTGCACCTAAGCATTAA 1743 0.4693 MGEDGQKNRRIAIIAISTIFLVAMVLAVTIGVNYSLIGSNDDEKGSNGRAATTVKAVKTLCKPTYYPKECQQSLNSEAGNTTDPRELIKIAFNVTIREIRNGVKKTNLMHEIENDPMSKMAIDTCLQLMDLSISEFKRSLERMGKFDLDNLDNIVNSLTVWLSGAITYQETCLDGFKNSTNDAGRKMKTLLTSTMHMSSNALAIITELANTVSEMDHTTMTKDPRQLLQEEHVFGRDEVIPPWVMEAGGVRRLLHQSQNNKVKANVVVAKDGSGDYKSINKALQKVPQKNQRPFVIYIKEGVYHEYVEVTKKMSHVVFVGDGGQKTRITGNKNFVDGVNTYKTASAAILGDYFVAINIGFENTAGAAKHQAVAVRVQADKSIFFKCSMDGYQDTLYAHAMRQFYRECTISGTIDFVFGDAVAVFQKCTFVVRKALENQQCIVTAQGRKDRHQPSGTVLQGCSIVADKKEKLENKVYLARPWKNHSRTIFMDTYIGDLIEPEGYMPWQGPTGLSGMDSCFYAEYNNAGPGSNKSKRVKWRGIIKLTSESVTRYLPYKFFHGDDWIKITRIPYSKAVTAPKH 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1727 580 Pfam Pectinesterase 265 561 IPR000070 GO:0030599|GO:0042545
Aed8g1727 580 ProSitePatterns Pectinesterase signature 2. 409 418 IPR033131 -
Aed8g1727 580 CDD PMEI-like_3 59 210 - -
Aed8g1727 580 Gene3D Invertase/pectin methylesterase inhibitor family protein 51 210 IPR035513 -
Aed8g1727 580 PANTHER PECTINESTERASE 10 576 - -
Aed8g1727 580 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 208 IPR035513 -
Aed8g1727 580 Gene3D - 259 575 IPR012334 -
Aed8g1727 580 Pfam Plant invertase/pectin methylesterase inhibitor 56 204 IPR006501 GO:0004857
Aed8g1727 580 PANTHER PECTINESTERASE 10 576 - -
Aed8g1727 580 SMART PMEI_2 52 204 IPR006501 GO:0004857
Aed8g1727 580 TIGRFAM PME_inhib: pectinesterase inhibitor domain 51 208 IPR006501 GO:0004857
Aed8g1727 580 SUPERFAMILY Pectin lyase-like 263 572 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1727 Aed-Chr8 22294677 22297253 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1727 3 577 Carbohydrate Esterase AT3G05610 48.532 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1727 K01051 - gmx:100794799 929.858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1727 8 22294677 22297253 Aed8g1727 8 22294677 22297253 ECH
Aed2g2432 2 27311289 27315598 Aed8g1727 8 22294677 22297253 PCT