Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1726 ATGGCGACAAACATGAAAACAACATTGTACACCTTTGTTTTCTTCTTCTTCACACTCTTTCTTTCTTCTTCATCTGATGGTGACTCATCATCATGCGACACTACACCCTACCCAGCATTCTGTAAAACTACTCTGCCTTCTGAATATCATTATCTATCCGCACAAGACCAATGCCGTTTCTACCTTCAGCAATCCTTATTAGTTACAAAAACCATTTACAAATTGGTCTCTACTAATCTCAGAGACGACCACAGTGCCATTCCTTATTCAACTAAGCACGCCATTGAAGATTGTTTCAATCTTGAAGCACTGAACACTGATTTCTTGAACAAAGTCCTCCAAGCCATTGAAAACAACAACGTGGGTAGCTATCAGCAGGTCTATGACTTGCAAACGTTACTCAGTGCGGTCTTAACCAACCATGAAACGTGCTTGGATGGTTTCAACGAGGTAGAACCCTATCCCATAGTTACCCGTGCCTTGTTAAGCCCACTTTCTAATGCCACCAAACTTTATAGCATGTCTCTCTCCCTTTTCACCCGTGGTTGGGTTAGCAATGATGCCGCGGCTGCCGCCACAGCTGTTAATAGGAAGTTACTGCAAACAAGAAGCGTTGACAGAGTGTTGGTGACACAAAAAGTAGTGGTGAGTCCAAATGGGAATGGGGATTTCACCACCATAAATGATGCAGTACAGGCTGCACCTGACAACACCAGAACCAACAACGGGTACCATGTAATTTATGTGGTCGCTGGGATTTACAGTGAGTACGTGTCTATTCCTCCGAGCAAGCAGAACCTGATGCTGTTTGGAGAAGGCATCAACCGCACTGTGATCATCGGCAATCGCTGCGTTGATGATGGCTTGACCGTTTTCCAAACTGCGACTTTTGGTATATCTGGAACAGGGTTTGTTGCAGTGAACATAACATTTCGCAACACTGCGGGGTCCATGAAGAAGCAAGCGGTGGCTTTGAGAAACGGGGCAGACAAGTCTGCGTTCTACCGTTGTAGCTTTGAAGGTTACCAAGACACACTGCACGTTCATTCCATGACACAATTCTACAAAAAATGTGACATTTACGGCACAGTGGATTTCATTTTTGGAAATGCAGCAGCAGTATTCCAAGAGTGCAACATTTATCCAAGACTTCCTAAGCAAGGCCAATTCAATGCTATCGTAGCACAGGGCCGAACGCAGCCAAACCAAACCACTGGCATCACCATACAAAACTGTAAGATAACAGCAGCAAGTGACTTGGGCAATGCTAGTAACAGTTACAATGGGGTAAAGACGTATTTGGGTCGGCCTTGGAAGGAGTATTCCAGGACTGTGTACATGCAATCTTTCATCGATGACCTAATTGATCCAAAGGGGTGGAGCATTTGGTCATCGGATTTTGCTTTGAACACGCTCTATTATGCAGAGTTTGCTAACTCGGGACCTGGCTCTAACACTAGCAATAGGGTCACTTGGGAAGGGTACCATCTCATTGACAAAAAGGGTGCAAGTCCTTTCACGGTGCACCAGTTTATTCAAGGTGACACTTGGTTGCCCTATACAGGAGTTCCTTTCAAAGCTGGGATACAATAG 1593 0.4488 MATNMKTTLYTFVFFFFTLFLSSSSDGDSSSCDTTPYPAFCKTTLPSEYHYLSAQDQCRFYLQQSLLVTKTIYKLVSTNLRDDHSAIPYSTKHAIEDCFNLEALNTDFLNKVLQAIENNNVGSYQQVYDLQTLLSAVLTNHETCLDGFNEVEPYPIVTRALLSPLSNATKLYSMSLSLFTRGWVSNDAAAAATAVNRKLLQTRSVDRVLVTQKVVVSPNGNGDFTTINDAVQAAPDNTRTNNGYHVIYVVAGIYSEYVSIPPSKQNLMLFGEGINRTVIIGNRCVDDGLTVFQTATFGISGTGFVAVNITFRNTAGSMKKQAVALRNGADKSAFYRCSFEGYQDTLHVHSMTQFYKKCDIYGTVDFIFGNAAAVFQECNIYPRLPKQGQFNAIVAQGRTQPNQTTGITIQNCKITAASDLGNASNSYNGVKTYLGRPWKEYSRTVYMQSFIDDLIDPKGWSIWSSDFALNTLYYAEFANSGPGSNTSNRVTWEGYHLIDKKGASPFTVHQFIQGDTWLPYTGVPFKAGIQ 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1726 530 SUPERFAMILY Pectin lyase-like 213 527 IPR011050 -
Aed8g1726 530 ProSitePatterns Pectinesterase signature 2. 360 369 IPR033131 -
Aed8g1726 530 SMART PMEI_2 22 178 IPR006501 GO:0004857
Aed8g1726 530 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 178 IPR006501 GO:0004857
Aed8g1726 530 Pfam Pectinesterase 214 515 IPR000070 GO:0030599|GO:0042545
Aed8g1726 530 Pfam Plant invertase/pectin methylesterase inhibitor 30 178 IPR006501 GO:0004857
Aed8g1726 530 Gene3D - 208 529 IPR012334 -
Aed8g1726 530 CDD PMEI-like_3 34 183 - -
Aed8g1726 530 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 181 IPR035513 -
Aed8g1726 530 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 17-RELATED 14 528 - -
Aed8g1726 530 PANTHER PECTINESTERASE 14 528 - -
Aed8g1726 530 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 181 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1726 Aed-Chr8 22292809 22294491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1726 4 529 Carbohydrate Esterase AT4G02330 46.073 6.21e-173 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1726 K01051 - gmx:100810329 751.51