Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1722 ATGTCGTCAGAGCCGCTGCTTCCGCCGTCGGAAGCATTGTCGGAATCTCACCATCCCTCTCGGCGATGGATTTTCGAAGAGTTGCCGACGGCCACCATCGTTTCGTTCAAGTGGCGTCTAGTGAAGAAGGCATCACAACTTCTCTATTTACAGTTCTGTTTGCGGAAACGTGCATTAATCGAAGATTTTCATGACAAGCAAGAGCAGTTAAAAGAATGGCTAGGAATAGTAGATCACACGGTAATGGTGCAAGATGACGAAGAACCTGATGATGGAGCTGTGCCTTTACATCACGAAGACAGTGTTAAAAACAGATATGTTCCATCTGTTGCTGCTCTATCAATAATTCGTCCATCAATAGGAGGGCAGCAGTCAATTGCAGATAGAGCCAAAGTCACAATGCAGGGTTATTTGAATCGATTTTTAGGAAGCCTCGATATTGTGAATTCTCAAGAGGTCTGCAGGTTTTTGGAAGTCTCCAAGCTATCTTTTTTACAGGAGTATGGTCCAAAACTGAAAGAGGGATATGTAATGGTGAAGCATTTGTTAAATATTGCACAGGATTCAGATGCATCATGCTTCCCATGCAATTGGTTTCATTGTTGTAATAACAGCTGGAAGAAGGTATGGGCTGTTTTGAAACCTGGGTTTTTGGCCTTCCTGGATGATCCCTTCAACAACAAACCACTGGATATAATGATTTTTGATATCCTCCCTTCCTCAAATGGAGATGGAGGGACCAAGATATTTTTAGCTGGTCCTATAAAAGAACGAAACCCTTTGTGTTACACATTCAAGGTTACTAGTGGAAATAGGAGCATATTGTTGAGAACTGCAAGCAGTGCTAAAGTAAAAGCTTGGGTTATTGCAATAAATGAAGCTAGTCTAAGACCTCTTGAGGGTTGGTGTTGTCCTCATCGCTTTGGTTCCTTTGCTCCCATAAGAGGTTTGACTGAAGATGGGAGCCAAGCTCAATGGTTTGTAGATGGACATGCAACATTTGAAGCAATTGCTACTTCAATTCAAGATGCGAAGTCAGAGATTTTCATCACAGGTTGGTGGCTGTGCCCAGAGCTATATCTGAGACGACCTTTTGATAGCTTTTCTACCTCACGTTTAGACTCATTACTAGAAGAAAAGGCTAAACAAGGAGTTCAGATCTATGTGCTTCTCTACAAGGAGGTTTCTCTAGCTTTAAAAATCAACAGCTCGTACAGTATGAGAAGACTGCTTAAAATTCATGAGAATGTGAGGGTATTACGCTATCCAGATCATTTCGCTGCTCGCATATATTTATGGTCGCACCATGAAAAACTTGTTATTATTGATTACAAGATTTGCTACATAGGAGGATTAGATTTATGCTTTGGTCGATATGACACACCTGAACATAAAGTGGGTGACTGTCCTTCTGTAATATGGCCTGGGAAGGACTATTACAACCCAAGAGATGAATTGGATCGCAAGAAGTATCCTCGTATGCCATGGCATGATGTCCATTGTGCTCTTTGGGGACCTCCCTGTCGTGACATTGCTCGGCACTTTGTTCAACGTTGGAACCATGCTAAGAGAACTAAGGCTCCAAATGAACATGGAATTCCACTACTTATGCCTCACCATCACATGGTCCTCCCTCATTACATGGGAAGAAGCAAAGAGATAGACATTGATGAAAAGAAAGACGAAGACAAGTGGAAAGAAATTGACAGGAAAGATTCATTTTCCTCAGAGTCTCCAATGCAGGATATACCACTACTTTTACCTCAAGAAGCTGATGGAGATCATACAAATTCAAGTGAAAATTATCCATTATTGTCTCAAAATCTGGAGCATGAAACTTTAGTTTCAGACACCCAGATAAAAGGGTTTCATGATGAAGTTGTTCCTTTAAACTTGGGGGCACAACCTGTTGTCAATGCTCTAGATGATTGGTGGGAAACACCAGAAGAAATCAATGATGACACTAATATGGAATATGGTCAAGTTGGTCCACGTACTGCCTGTCACTGTCAGGTAATCAGAAGTGTCAGCCAGTGGTCTGCTGGAACAAGTCAGCCTGAAGAAAGCATTCATACTGCATATTGTTCTCTTATTGAAAAAGCAAAGCATTTTATCTACATTGAGAACCAATTTTTCATATCAGGTCTAGCAGGGGATGACACTATGCTGAACCGTGTTTTGGAAGCACTATACAGGCGTATTCTGCAAGCCCACAAAGATGAGAAAGATTTTAGAGTTATAATTGTGATTCCCCTCTTACCTGGCTTCCAGGGTGGTCTGGATGATGGTGGTGCTGCTACTGTGAGAGCCCTAACACATTGGCAGTATAGAACAATTTCTAGAGAAAAACACTCCATATTATACAATCTTGAAGCTATACTTGGTCCTAAGACACATGATTATATTTCCTTCTATGGTCTACGATCTCATGGTAGACTTTATGAAAATGGCCCTGTGGCAACAAGTCAGGTATATGTGCACAGTAAATTGATGATAATTGATGACCGTGTAGCTTTTATTGGATCTTCTAATATAAATGACCGTAGTTTGCTTGGATCAAGAGACTCTGAGATTGGAGTGCTTATAGAAGACAAAGAATATGTTGAATCATTGATGAATGGAAAACCATGGAAGGCTGGGAAATTTTCCTATAGCCTCCGCTGCTCCCTCTGGTCTGAGCACCTTGGTCTTCATACCGGAGAGATCAGTAAAATCAGTGATCCGGTGGCAGATACAACCTACAAGGACTTGTGGTCAGCAACTGCAAAGGAAAATACTAGGTTATACCATGAGGTCTTTGCTTGCATTCCCAACGATCAGATACACTCAAGAGCTTCACTTCGGCAAAGCATGGTTCAGTGGAAAGAAAAACTTGGACATACCACCATAGATATGGGAATAGCCCCAGATAAGTTGGTCTGTCTTGAAAATGGAGAAAACAAAACAATAGACCCGACAGATAGGTTGAAGTCTGTGAAGGGACATCTTGTTTCCTTTCCCTTGGAGTTCATGCGTGAGGAAGATCTAAGACCAGCTGTTATTGAGAGCGAGTTTTATGTTGCTCCCCAAGTATATCATTAA 3081 0.4151 MSSEPLLPPSEALSESHHPSRRWIFEELPTATIVSFKWRLVKKASQLLYLQFCLRKRALIEDFHDKQEQLKEWLGIVDHTVMVQDDEEPDDGAVPLHHEDSVKNRYVPSVAALSIIRPSIGGQQSIADRAKVTMQGYLNRFLGSLDIVNSQEVCRFLEVSKLSFLQEYGPKLKEGYVMVKHLLNIAQDSDASCFPCNWFHCCNNSWKKVWAVLKPGFLAFLDDPFNNKPLDIMIFDILPSSNGDGGTKIFLAGPIKERNPLCYTFKVTSGNRSILLRTASSAKVKAWVIAINEASLRPLEGWCCPHRFGSFAPIRGLTEDGSQAQWFVDGHATFEAIATSIQDAKSEIFITGWWLCPELYLRRPFDSFSTSRLDSLLEEKAKQGVQIYVLLYKEVSLALKINSSYSMRRLLKIHENVRVLRYPDHFAARIYLWSHHEKLVIIDYKICYIGGLDLCFGRYDTPEHKVGDCPSVIWPGKDYYNPRDELDRKKYPRMPWHDVHCALWGPPCRDIARHFVQRWNHAKRTKAPNEHGIPLLMPHHHMVLPHYMGRSKEIDIDEKKDEDKWKEIDRKDSFSSESPMQDIPLLLPQEADGDHTNSSENYPLLSQNLEHETLVSDTQIKGFHDEVVPLNLGAQPVVNALDDWWETPEEINDDTNMEYGQVGPRTACHCQVIRSVSQWSAGTSQPEESIHTAYCSLIEKAKHFIYIENQFFISGLAGDDTMLNRVLEALYRRILQAHKDEKDFRVIIVIPLLPGFQGGLDDGGAATVRALTHWQYRTISREKHSILYNLEAILGPKTHDYISFYGLRSHGRLYENGPVATSQVYVHSKLMIIDDRVAFIGSSNINDRSLLGSRDSEIGVLIEDKEYVESLMNGKPWKAGKFSYSLRCSLWSEHLGLHTGEISKISDPVADTTYKDLWSATAKENTRLYHEVFACIPNDQIHSRASLRQSMVQWKEKLGHTTIDMGIAPDKLVCLENGENKTIDPTDRLKSVKGHLVSFPLEFMREEDLRPAVIESEFYVAPQVYH 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1722 1026 CDD PLDc_vPLD1_2_yPLD_like_2 682 866 - -
Aed8g1722 1026 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 431 458 IPR001736 GO:0003824
Aed8g1722 1026 PANTHER PHOSPHOLIPASE D 35 1023 IPR015679 -
Aed8g1722 1026 PANTHER PHOSPHOLIPASE D ZETA 2 35 1023 - -
Aed8g1722 1026 Pfam PLD-like domain 695 869 IPR025202 -
Aed8g1722 1026 SMART pld_4 822 849 IPR001736 GO:0003824
Aed8g1722 1026 SMART pld_4 431 458 IPR001736 GO:0003824
Aed8g1722 1026 CDD PH_PLD 148 294 - -
Aed8g1722 1026 CDD PLDc_vPLD1_2_yPLD_like_1 324 469 - -
Aed8g1722 1026 Gene3D - 170 300 IPR011993 -
Aed8g1722 1026 SUPERFAMILY Phospholipase D/nuclease 659 872 - -
Aed8g1722 1026 SMART PH_update 171 298 IPR001849 -
Aed8g1722 1026 Pfam Phospholipase D Active site motif 431 458 IPR001736 GO:0003824
Aed8g1722 1026 SUPERFAMILY PH domain-like 165 297 - -
Aed8g1722 1026 SUPERFAMILY Phospholipase D/nuclease 285 539 - -
Aed8g1722 1026 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 822 849 IPR001736 GO:0003824
Aed8g1722 1026 Gene3D Endonuclease Chain A 318 541 - -
Aed8g1722 1026 Gene3D Endonuclease Chain A 647 885 - -
Aed8g1722 1026 ProSiteProfiles PH domain profile. 170 296 IPR001849 -
Aed8g1722 1026 Pfam PH domain 187 295 IPR001849 -
Aed8g1722 1026 PIRSF PLD_euk 481 1026 IPR016555 GO:0004630|GO:0006654|GO:0048017
Aed8g1722 1026 PIRSF PLD_euk 12 488 IPR016555 GO:0004630|GO:0006654|GO:0048017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1722 Aed-Chr8 22266142 22273897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1722 24 1026 Phospholipase D Gene Family (Wang group) AT3G05630 63.343 0.0 1315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1722 K01115 - gmx:100796914 1937.92