Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1721 ATGAGTGCAATGGAAGAGAAGCCGCGAAAGCAATGGCAAAGGAAGCTAAAAAAAAATCACTTCATGTTGCATAGCTCCGGCACAGTTAATATTGATGGTTCAAACAACTTTGCCTCAGTTTTCTCCAAGAAAGGCCAGAAAGGAGCCAATCAAGATTGCTGCGTAGTGTGGGAAGAATTTGGGTGCCAAAAAGACATGATCTTCTGCGGGATATTTGATGGGCACGGGCAATGGGGTCACTTTGTGGCCAAAAGAGTACGAAAGTCAATGCCACCATCTTTGCTATGCAACTGGCAAGAGACGCTTTCTCAAACTTCACTTGATGCAGATGTTGATTTTGATATCGAGACAGAGAAAAAGCAAAACCGGTTTAATGTATGGAAGCATTCATACTTGAAGACTTGTGCTGCCATTGATCGTGAACTAGAGCAGAATCGCAAGATAGATTCATTTTACAGCGGAACAACTGCCTTGTCAATTGTTAGACAGGTGTGGGATGTAATATCGAATAAAGAAGCGGTGGATATTGTGTCTTCAACTGCAGACAAAACAGAGTCGTCAAAACGTTTGGTGGAGTGTGCAATGCGTGCATGGAAACGCAAGAGGCGAGGCATTGCAATGGATGATATTTCAGCTATTTGTCTCTTCTTCACTTGA 657 0.4292 MSAMEEKPRKQWQRKLKKNHFMLHSSGTVNIDGSNNFASVFSKKGQKGANQDCCVVWEEFGCQKDMIFCGIFDGHGQWGHFVAKRVRKSMPPSLLCNWQETLSQTSLDADVDFDIETEKKQNRFNVWKHSYLKTCAAIDRELEQNRKIDSFYSGTTALSIVRQVWDVISNKEAVDIVSSTADKTESSKRLVECAMRAWKRKRRGIAMDDISAICLFFT 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1721 218 Gene3D - 163 218 IPR036457 -
Aed8g1721 218 SMART PP2C_4 24 215 IPR001932 -
Aed8g1721 218 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 16 163 - -
Aed8g1721 218 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 164 217 - -
Aed8g1721 218 PANTHER ALPHABET, ISOFORM E-RELATED 164 217 - -
Aed8g1721 218 PANTHER ALPHABET, ISOFORM E-RELATED 16 163 - -
Aed8g1721 218 Gene3D - 28 162 IPR036457 -
Aed8g1721 218 SUPERFAMILY PP2C-like 35 161 IPR036457 -
Aed8g1721 218 SUPERFAMILY PP2C-like 164 217 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1721 Aed-Chr8 22257287 22261521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1721 17 163 PP2C-type Phosphatase Gene Family AT5G27930 66.667 1.25e-72 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1721 - - gmx:100793051 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2424 2 27272238 27275291 Aed8g1721 8 22257287 22261521 PCT
Aed4g2114 4 24119003 24120256 Aed8g1721 8 22257287 22261521 PCT