Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1715 ATGGCGACGAGAAATCGCACTCTGCTTTTCAGAAAGCACAGAGATGCGTTGAAGAGTGTTCGGGCTCCCTCCTACTCTTCGCCGTCGTCCACCGCTTCCGGCGCCGGCGGTGGCCCTGTCATCGAATTGGTCAGCACTTCGCTTCGCAATCCCAATCGCTCTTACGCTCCGCTCAGTACCGAGGATCCCGGCAATTCCAGTAAGAGTCTAAATGCAACTACTGTGGGGCTACCACCGGCATGGGTGGATTTATCAGAAGAAATATCAGCAAATGTGCAACGTGCACGTTTGAAAATGGCAGAGTTAGCCAAGGCTCATTCAAAGGCTTTGATGCCATCATTTGGAGATGGTAAGGAAGACCAACATGCTATTGAGACTCTAACATATGAGATAACTGACTTAATAAAGAAATCAGAGAAGAGACTGCGGAGGCTTTCTGCTACTGGGCCTTCTGAGGATTCCAATGTCAGGAAAAATGTGCAGCGCTCTCTTGCTACTGACCTTCAGAACCTCTCTGTTGAGCTCCGCAAGAAACAATCAACTTATTTAAAGCGCCTCAGACTGCAAAAAGAGGGTCAAGATGGAGTTGATCTAGAGATCAACTTAAAAAATGGAAATAAATCCAGATATGAAGATGATGACTTGGATAATATGGTATTTAATGAGCATCAAATGGCCAAGCTGAAAAAAAGTGAAGCATTCACAGTAGAAAGAGAAAAAGAGATCCAACAGGTTGTGGAATCTGTGAACGAGCTTGCTCAGATTATGAAGGACCTATCAGTACTAGTCATAGATCAGGGAACCATTGTTGATAGAATAGACTACAACATTCAGAATGTTGCAACCACCGTTGAGGATGGCCTTAAACAGCTGCAGAAGGCAGAGAGATCTCAGAAAAAGGGAGGCATGGTGATGTGTGCTAGTGTGCTTGTCATCATGTGCTTTGTCATGTTGGTTCTCTTAATCATTAAGGAAATTATTTTGTGA 987 0.4458 MATRNRTLLFRKHRDALKSVRAPSYSSPSSTASGAGGGPVIELVSTSLRNPNRSYAPLSTEDPGNSSKSLNATTVGLPPAWVDLSEEISANVQRARLKMAELAKAHSKALMPSFGDGKEDQHAIETLTYEITDLIKKSEKRLRRLSATGPSEDSNVRKNVQRSLATDLQNLSVELRKKQSTYLKRLRLQKEGQDGVDLEINLKNGNKSRYEDDDLDNMVFNEHQMAKLKKSEAFTVEREKEIQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQKAERSQKKGGMVMCASVLVIMCFVMLVLLIIKEIIL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1715 328 Coils Coil 85 105 - -
Aed8g1715 328 PANTHER TARGET SNARE COILED-COIL-LIKE DOMAIN-CONTAINING PROTEIN-RELATED 1 323 - -
Aed8g1715 328 CDD SNARE_syntaxin16 237 293 - -
Aed8g1715 328 Gene3D - 78 286 - -
Aed8g1715 328 PANTHER SYNTAXIN 1 323 IPR045242 -
Aed8g1715 328 SMART tSNARE_6 227 294 IPR000727 -
Aed8g1715 328 SMART SynN_4 72 187 IPR006011 GO:0016020
Aed8g1715 328 MobiDBLite consensus disorder prediction 45 72 - -
Aed8g1715 328 ProSitePatterns Syntaxin / epimorphin family signature. 238 277 IPR006012 GO:0005484|GO:0006886|GO:0016020
Aed8g1715 328 Pfam SNARE domain 268 320 IPR000727 -
Aed8g1715 328 SUPERFAMILY t-snare proteins 77 287 IPR010989 GO:0016020|GO:0016192
Aed8g1715 328 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 232 294 IPR000727 -
Aed8g1715 328 MobiDBLite consensus disorder prediction 20 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1715 Aed-Chr8 22206842 22211056 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1715 1 317 SNARE and Associated Proteins AT3G05710 76.923 0.0 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1715 K08489 - gmx:100796741 565.074