Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1711 ATGATTAGGACTGAATTATCTAATATGAAGCAACCTCCTGTTTCACTTGCAACCCTGATTGGCCAGGAGCTACGAAATGGAAAAATCGAAAATCCTTTTGTGAAGTATGGGCAGGCTGGCTTGGCAAAGAAAGGAGAAGATTACTTTCTAATCAAGACAGATTGCCAGAGAGTTCCCGGGGATTCATCAACACTGTTTTCTGTCTTTGCGATCTTTGACGGGCACAATGGTATATCTGCTGCCATTTTTGCGAAGGAAAACATATTAAGTTATGTTTTAAGTGCTATACCGCAAGATATCAGTAGGGATGAGTGGCTTCAAGCTCTGCCTCGTGCTCTAGTTGTTGCCTTTGTAAAAACTGACATTGAGTTTCAGAAAAAAGGGGAAACTTCTGGAACAACCGCTACATTTGTTGTGATTGATGGATGGACTGTTACTGTTGCATCTGTCGGGGATTCCCGTTGCATATTAGATGCTCAGGGAGGTGTTGTTTCTCTCTTGACAGTTGATCACAGATTGGAAGAAAATGTAGAAGAGAGGGAACGCGTTACTGCCAGTGGTGGTGAAGTAGGAAGACTGAATGTATTTGGAGGAAATGAGGTTGGGCCTCTTCGCTGCTGGCCTGGTGGATTGTGTCTTTCTAGATCAATTGGAGACACAGACGTGGGAGAATTTATTGTGCCAATACCACATGTTAAGCAAGTGAAGCTTTCAAATGCTGGTGGAAGACTTATTATAGCTTCTGATGGTATTTGGGATACTTTATCTTCTGATATGGCTGCCAAGTCATGCCGAGGTCTACCTGCAGAGCTTGCTGCAAAGCTGGTGGTTAAGGAAGCTCTAAGGTCAAGAGGGCTGAAGGATGATACAACTTGCCTCGTTGTAGATATTATTCCTTCAGATCATCCTGTGTTACCAACAATTCCAAGAAAGAAACGTAATGTGCTAACATCCCTTCTCTTTGGAAAGAAGTCTCAAAACTCTACAAACAAAGGCACCAATAAGCTTTCTGCTGTTGGTGTTGTGGAGGAATTGTTTGAAGAGGGTTCTGCAATGCTTACTGAGAGGTTAGGCAAGGATTTTCCCTTGAATACAAATTCTGGGATTTTCCGCTGTGCGGTTTGCCAAGCAGATCAGCCCTCTGGAGATGGTTTATCAATGAGCACTGTGTCTTTTTTCCCCCCAGTATCTAAGCCATGGGAAGGTCCGTTCCTCTGCACAAACTGTCAGAAGAAGAAAGATGCCATGGAAGGAAAAAGGTCTACCATGCCCTCAGACTCAGAGATAGCATAG 1293 0.4362 MIRTELSNMKQPPVSLATLIGQELRNGKIENPFVKYGQAGLAKKGEDYFLIKTDCQRVPGDSSTLFSVFAIFDGHNGISAAIFAKENILSYVLSAIPQDISRDEWLQALPRALVVAFVKTDIEFQKKGETSGTTATFVVIDGWTVTVASVGDSRCILDAQGGVVSLLTVDHRLEENVEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDTLSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPVLPTIPRKKRNVLTSLLFGKKSQNSTNKGTNKLSAVGVVEELFEEGSAMLTERLGKDFPLNTNSGIFRCAVCQADQPSGDGLSMSTVSFFPPVSKPWEGPFLCTNCQKKKDAMEGKRSTMPSDSEIA 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1711 430 Gene3D - 34 301 IPR036457 -
Aed8g1711 430 SUPERFAMILY PP2C-like 38 297 IPR036457 -
Aed8g1711 430 CDD PP2Cc 43 297 IPR001932 -
Aed8g1711 430 SMART PP2C_4 23 295 IPR001932 -
Aed8g1711 430 ProSiteProfiles PPM-type phosphatase domain profile. 25 297 IPR001932 -
Aed8g1711 430 PANTHER ALPHABET, ISOFORM E-RELATED 4 424 - -
Aed8g1711 430 SMART PP2C_SIG_2 50 297 IPR001932 -
Aed8g1711 430 Pfam Protein phosphatase 2C 63 280 IPR001932 -
Aed8g1711 430 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 4 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1711 Aed-Chr8 22174610 22177872 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1711 1 420 PP2C-type Phosphatase Gene Family AT1G09160 75.476 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1711 - - gmx:100794630 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2419 2 27234963 27239058 Aed8g1711 8 22174610 22177872 PCT