Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1705 ATGGAGATCCAGAAAAAACGTTTCAAGGGAAGCTTCCTTAGCTTCTTTGACTGGAATGGCAAATCTCAAAAGAAGCTGCTTTGTGACAGGCCTAACTTACCTGATGTTTCAAAGCAAGGAAAGGAAAACATGGACAACATGCCAAAGTCACAGGACAATAGGATAAAAATGGATGACAATGGAGAAAGTCCTAGCAATAATGCAAGTTGTGATTTTGATTGTGCCATATCAATTAATAGTGATGAAGGATGTGGGACTAAAGCCCCAGGGTTAGTAGCCAGACTTATGGGTTTGGATTCATTGCCAGTTTCAACTGTCTCTGAGCTCTCCTCATCATCCACTTCATTATATGGCTCCAACTCTCTTGGATCCTCTCATTCACATGATGAGGATGTTCTTCACTCAATGGCTGACTATTATTACTCTGTGGATCCCATAAATATTCGACATAAGCTGGAGAGGTCTTCTTGGGGTGCCATGCAATCAAGAGCTCAGAAAGTGGGAAACCCGGCAATGAAGAGATTTCAGACTGAAATGTTGCCTCCAAAATCTGCTAAATCCATTCCAGTTACTCACAACAAACTTTTGTCTCCTATCAAGAGCCCTGGTTATAGTTATATGCAACCTAAGCATGCAGCTCATATAATGGAGGCAGCTGCCAAAATAATTGAGGCTAGTCCCCAACCATATATGAGGAATAGAATGTCTTCATCTGGACCCTCATCTGTTCCCTTAAGAATTCTTGATCTGAAAGAGAAATTGGAAGCTGCACAATATGAATCCAAGTTCATGGATACACACACTGCTAACCTTCTGAATGGCAAGCCTAGTGAGAGGAGAAACAATTTATGTAAATCCACTTCAAGTTTCAAAGGTTCAAGGGATTCGGTAAACAACAGTTATCGTCAGTTGGCAACCAAAGGAAAATCTGCTTCATTTGCAATGCCATCTAAAACCAATGCTCAGAGCCGTGATGAATTGGTTTTGAATGGTAATAGGAGATATATGAAGCAGAAAGAACTGAATGATATAAAATCAAACCAGGAGCCCAGGAGCCAGAGGAAACAAATTGCAGACCGGGCCAGGGTCATGCAGCAGAGACAGAGAGCTTGTGCAAGCCAGAATAGCAATGTGCTTGGGAAGAATAATCAAAAGAAGAATAGTGTAATCAGCAAGGGTAGTTCAGCTTCAAAGGTGAACTCCAATAAGCCAGCCCGAACTTCGTCTTCAGAAAGTTCTACTTCTACTGGAGTAAAGAAGACCACAAAAAAGGGTGCTGTTAATGCCAACATTGAGCCCAAAAGGTTAGGCACAAGGGTCACTGATACTATAAAGGAGTTCCCAGATTCCAAAAGGAAGAGTATTTCCCAAAAGAAAAACTATATCAGTAGAGATGTTCACAATGAGGCAAGAGGTTCTGATATTGCAGCTAACACTTACGAAAACAAGTCTGTAAAATGCAATATTACAACTGATGGAAGTATTGACCAGGATACACTTAGCGTGGAAGGAGGCAATGGTGTGATTTCATTTACATTTACATCTCCCTTGAGAAGAAACATGACTAAGTTACAGTCCTCCACTGAGCCAGCAATGGGAACAAGGAACAAAATTGATGTCAATTCTTGTAGTGATATTGATAAGCTTTATCCCCAAAAGTCATCATTTTCTCCTCCCAGGTTACATGTAATAGATGGTGATGCTTTAAGTGTTCTTTTGGAGAAAAAGCTGCAAGAGTTGACATCTAGAATTAACCCACCTCAGTGCTCCCTCGCGACAGAAGGGTCTTCCACTGGTTTAAGATCTAGTTTGGAAGACAAATTTCAAGGTGTGTTAAGCACCACAGTAAGGGAGCAAGACAGAAGCTTTCGCAATAAATTGGACAGCATGCATGACAATTGTTCTTCAAGTGATATTGTGGTGCTTAGCATGAATCAGCAACTGCAGACATCAGAATCAGTGGAAGAGCCTAGCTGTAGCAGCAACAGTGAAAACAAAAATGGAAGTTACTTAGATAGTGCATATGGCCGCACAGTTTATTCTTCCATGCAAGATGAAGAGGTATCTAATTTTTCTCCAATGAATGAATCTATGTCGCTTGAAAACGAGGCAGAATGGTCTGAGCAAAGCTCTTCCATGGTGATGGGGGATAACATGGCCAGTGAACAATCAAGTGTAATATCAAACTCGACCGAATTTACAAGGTCGGCAAGGAACATGGAACTTGAGTATGTAAAGGATATATTCAGCAACGCAGAGTTGATGACAGAAGAATTTGTGGTGGGTGAGACAGATAAGATCATAATGCCAAATCTCTTTGATAAGTTGGAGAATAAAGGCCTTGAAGAGTACTCTAAGATTGATGAGAGGAAGGCTATATTTGACACTGTGAGTGAGTGCCTTGAATTAAGATGTAGACAAGTTTTTGTTGGAAGCTGCAAAGCATGGCCTAAATGGGTGGCTTCAGTTCAGCGGAAGAACTGTTTAGCAGAAGAGTTATACAAGGAAATGCTGAGCTTTAGAAATATGGAAGAAGAAGAAGAGGTAGAGGTGGATGAACTTATCAGCAAGGACATGAGCACTGGATGGGGTAGATGGCTTGACTTTGACATTGAAGTCTTTGAAGAGGCTTCTGAACTTGAGTTTGATATTCTAACCTATTTGATTAACGATTTGGTTTCTGATTTGTTGCACGTTTAA 2700 0.4081 MEIQKKRFKGSFLSFFDWNGKSQKKLLCDRPNLPDVSKQGKENMDNMPKSQDNRIKMDDNGESPSNNASCDFDCAISINSDEGCGTKAPGLVARLMGLDSLPVSTVSELSSSSTSLYGSNSLGSSHSHDEDVLHSMADYYYSVDPINIRHKLERSSWGAMQSRAQKVGNPAMKRFQTEMLPPKSAKSIPVTHNKLLSPIKSPGYSYMQPKHAAHIMEAAAKIIEASPQPYMRNRMSSSGPSSVPLRILDLKEKLEAAQYESKFMDTHTANLLNGKPSERRNNLCKSTSSFKGSRDSVNNSYRQLATKGKSASFAMPSKTNAQSRDELVLNGNRRYMKQKELNDIKSNQEPRSQRKQIADRARVMQQRQRACASQNSNVLGKNNQKKNSVISKGSSASKVNSNKPARTSSSESSTSTGVKKTTKKGAVNANIEPKRLGTRVTDTIKEFPDSKRKSISQKKNYISRDVHNEARGSDIAANTYENKSVKCNITTDGSIDQDTLSVEGGNGVISFTFTSPLRRNMTKLQSSTEPAMGTRNKIDVNSCSDIDKLYPQKSSFSPPRLHVIDGDALSVLLEKKLQELTSRINPPQCSLATEGSSTGLRSSLEDKFQGVLSTTVREQDRSFRNKLDSMHDNCSSSDIVVLSMNQQLQTSESVEEPSCSSNSENKNGSYLDSAYGRTVYSSMQDEEVSNFSPMNESMSLENEAEWSEQSSSMVMGDNMASEQSSVISNSTEFTRSARNMELEYVKDIFSNAELMTEEFVVGETDKIIMPNLFDKLENKGLEEYSKIDERKAIFDTVSECLELRCRQVFVGSCKAWPKWVASVQRKNCLAEELYKEMLSFRNMEEEEEVEVDELISKDMSTGWGRWLDFDIEVFEEASELEFDILTYLINDLVSDLLHV 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1705 899 Pfam DUF761-associated sequence motif 80 107 IPR032795 -
Aed8g1705 899 Pfam Domain of unknown function (DUF4378) 741 890 IPR025486 -
Aed8g1705 899 MobiDBLite consensus disorder prediction 339 425 - -
Aed8g1705 899 MobiDBLite consensus disorder prediction 367 423 - -
Aed8g1705 899 MobiDBLite consensus disorder prediction 29 64 - -
Aed8g1705 899 MobiDBLite consensus disorder prediction 272 297 - -
Aed8g1705 899 MobiDBLite consensus disorder prediction 45 59 - -
Aed8g1705 899 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 899 - -
Aed8g1705 899 MobiDBLite consensus disorder prediction 647 670 - -
Aed8g1705 899 MobiDBLite consensus disorder prediction 339 362 - -
Aed8g1705 899 PANTHER DUF4378 DOMAIN PROTEIN 1 899 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1705 Aed-Chr8 22144963 22149823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1705 3 897 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 32.719 5.90e-97 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1705 - - gmx:102665160 1448.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2412 2 27175513 27180211 Aed8g1705 8 22144963 22149823 PCT