Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1685 TGCCATCACAGGATCAATCTAGCGAAATACGAATCAGATTTTCATACGATTCAAGCTGCCATTGATTCAATAAAAACAAATGATCAATGGTTGAAAATTCACATAAAGGCCGGCACATACGAAGAGAAGGTTCAAATTCCAAATGAAAAGCCATGCATCTTTTTAGAAGGTGAAGGAAAAGAAGTCACCACTATTACATACAATGACCACCAAAGAACAGATATTAGTGCCACGTTCTCTTCGTTTTCAGACAACGTCGTGCGTGTTTGGAATCAATTCACGTCAACTTTGATCCACGTCTACGTCTGGTAG 312 0.391 CHHRINLAKYESDFHTIQAAIDSIKTNDQWLKIHIKAGTYEEKVQIPNEKPCIFLEGEGKEVTTITYNDHQRTDISATFSSFSDNVVRVWNQFTSTLIHVYVW 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1685 103 Gene3D - 5 96 IPR012334 -
Aed8g1685 103 PANTHER PECTINESTERASE 11 93 - -
Aed8g1685 103 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 93 - -
Aed8g1685 103 SUPERFAMILY Pectin lyase-like 12 96 IPR011050 -
Aed8g1685 103 Pfam Pectinesterase 11 85 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1685 Aed-Chr8 22007786 22008226 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1685 6 87 Carbohydrate Esterase AT2G19150 48.193 5.34e-19 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1685 - - gmx:100800737 133.265