Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1683 ATGGATTCCTTCCACCCGAACGTAGATTCAAGTAATTCCGACACGTTGCGAGAATCTAATCAGAAGAAGCGCAGAAAAATCGGAGACCACGCCGCCGGCGATCACAATTCCACCGCTTCCGTCCCGTGGAGATCCGACGCTGAGCAGCGGATCTACTCCCGCCGCCTCGTGGAGGCTCTCCGCCGCACTCCGTCATCGGCGGCCAAGCCTAGGGCAGCCGGCCAGGTCCGAGAGACCGCCGACCGCGTCCTCGCGGCCTCCGCCTCCGCCAGAGGCCGGACGCGGTGGAGCCGCGCGATTCTCAACCGCTGGAAGAAGCTCCGCACGCAGCACAAGAAGGTGAAGAAGGCATCGTCGTCCAACAACGGTTTGAAGCGAACGAGGATTGGTAATAACGGAGAGAGGAGGAACCGGTTACCGGCTGTGCAGAAGAAAGCGCGCGTTCTCAGCCGGTTGGTTCCCGGTTGCCGGAAGGCCTCGTTCCCGAACCTTCTGGAAGAAGCCACGGACTACATCTCCGCCTTGGAGATGCAAGTGCGAGCCATGACGGCTCTCGCCGAACTACTCGCCGGCGCCGCGCCGGCCGGAATCTCCGACGGCGCGCTGAGTTGA 612 0.6258 MDSFHPNVDSSNSDTLRESNQKKRRKIGDHAAGDHNSTASVPWRSDAEQRIYSRRLVEALRRTPSSAAKPRAAGQVRETADRVLAASASARGRTRWSRAILNRWKKLRTQHKKVKKASSSNNGLKRTRIGNNGERRNRLPAVQKKARVLSRLVPGCRKASFPNLLEEATDYISALEMQVRAMTALAELLAGAAPAGISDGALS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1683 203 CDD bHLH_AtIBH1_like 134 183 IPR044549 GO:0006355
Aed8g1683 203 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 131 191 IPR036638 GO:0046983
Aed8g1683 203 MobiDBLite consensus disorder prediction 1 46 - -
Aed8g1683 203 MobiDBLite consensus disorder prediction 16 32 - -
Aed8g1683 203 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 15 202 IPR044660 GO:0006355
Aed8g1683 203 MobiDBLite consensus disorder prediction 1 15 - -
Aed8g1683 203 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 126 175 IPR011598 GO:0046983
Aed8g1683 203 MobiDBLite consensus disorder prediction 111 132 - -
Aed8g1683 203 PANTHER TRANSCRIPTION FACTOR BHLH150 15 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1683 Aed-Chr8 21993237 21993848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1683 1 182 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 44.670 9.91e-38 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1683 - - gmx:100783462 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1683 8 21993237 21993848 Aed8g1683 8 21993237 21993848 ECH