Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed8g1661 | ATGTCCAAGACAATTCAAATGCATGGATTCCCATCTAATATGTCAGCTGAAGAGGTGAAGAAATTTATGGAGCAACACACAGGCCACCAAACTGTTCATGCTGTAGAAGTTAGGCAGCATAAAGAAGGAGATCCTACAACAACATATGTTGATGTTCAATTCATAGACAGAAAAAGTGTTGAAACAATCTTGCTCTTAGTTACTCAGCACCTATCTTACAGTGCCTATGTTCTCAATGCTTCTGAAATGAAACATGACATTTTGCCAAAGCCAAGGATCTTTCCTCACAACATGGATGACATAGTAGTGCACTTTGGATGTTTAACATCCAAGGACAAACTTAGTGTACTCTGGGAACATCCAAATGCTTCAGTTAAATTCGGGTCCAGATTGAGAAACATCTATATATTTCTCCATTACTTGAAAATGGATTATAAGCTGCAGATTTCTTCTGAGAGTATATCGTGTATTGAGCTGTGCCATTCAGATGATTTAACCAAGAAAATTCTCCTTTTTCAGTTACGCGGTGCTCCTATGATCTATGAGAAAGATGTTTCTAAAAGCAAATATTTTAAGGAGGCTTGTGACAACCATTGGTTTCGAGGAGTAGATTTCACTCCATCATGCAGCATTGGACAATCTTCTGCTTTATGCTTTGAGCTTCCACAAGGTGTTGAGGTTCCAAAATTCAATCAGCACTATCGTAATTACAACGAAGTTGATGACAGAATCTTTACTCTTGAGAAACACCTTGGTTTCTCTTCTTCTAACCACAATTTTTTCCCCATAATGATCCCTCCAGAAGGCTTCAACTTGCCGTACAAAATATTGTTCAAAATCAACTCATTGATTCAGCATGGATGTCTTCCTGTGCAAGCAATTGACATCAATCTTTTCCATCTTCTTGATCCTAGAAGAGTAAGGATTGAATACATAGAAAGTGCCCTTCATAAATTAGATCAAATGAAAGAATGCTGCTATGAACCTGCACAATGGTTGGAGAAACAGTACAACAAATACTCATCAAATAGTCTAGTTCCAGTGTCTAGTGCTATTTCTTTAGATGATGGGTTGGTCTATGTGCATAGAGTAAAAGTAACTCCTTCCAAAATATACTTTTGTGGTCCTGAAGTGAACCTTTCCAACCGTGTCTTGCGCAACTATCCTGAAGACACTGATAACTTCCTCCGTGTTTCATTTGTTGATGAGGACATGTATAAACTTCATTCAGCTGATCTGGTGCCACGTTCATCGTCTACAGAAGTGGACAGAGAAACAAAGCTTCATGAGAGAGTACTCTCTACACTAAAAGATGGCATAGCAATTGGTGATAAGAAGTTTGAGTTTCTTGCCTTCTCACCGAGTCAATTACGGGATAACTCTGTATGGATGTTTGCACCAAGAACTGGACTTACTGCATCTGATATAAGAAAGTGGATGGGAGAGTTTCATGAAATTAGAAATGTGGCCAAATATGCAGCAAGGCTGGGTCAATCATTCAGCTCTTCCAGGGAAACAGTGAGTGTTGGCAGACATGAAATTGAAATCATTCCTGATGTAGAATTCAGAAGAGGTGAAACCAAATACTGTTTCTCTGATGGCATTGGGAAGATATCTTCTGAATTGGCTAAAGAAGTGGCTGAGAAATGTGGTTGTAGGGATAATAACATTCCATCAGCATTTCAAATCAGATATGGAGGGTACAAAGGTGTTGTTGCTATTGATCCTACTTCGTCAACTAAACTGTCCTTGAGAAAGAGCATGTGCAAGTACAAGTCAGAAAACACAAAATTGGATGTTTTGGCATGGAGCAAATACAAACCTTGTTACCTTAACCGACAAGTAATCACCCTCTTATCCACACTCGGGGTCAAGGATGGAGTCTTCAGAAAGAAACAAAGAGAGAAGGGGAGAAGACCACATCCTAATGAATGTTCAGGAAGTGACTTGGATGGAGATATCTACTTTGTCAGTTGGGACCCCGATCTTATTCCTCCTCGTCAGGAAAATCCAATGGATCATGAACCATCTCAAGTTATGAAAGTGGATCATGATGTTACATTACAGGAAGTTGAGGAGTATTTTGCTCACTACATAGTTAAAGACAGGCTAGGAATTGTTGCAAGTGCACACACTGTCTTTGCTGATAAGGATCCTGAAAGGGCAATGAGCCCTGCATGCATTGAGCTTGCAAAGCTACACTCAACAGCAGTTGATTTTGCAAAATCTGGCGTGCCAGCAGAATTTCCACCGCATCTCCACGTTGAAGAGTATCCGGATTTCATGGAAAAGCCAGACAGACAAAGCTACCAATCAAACAGCATAATAGGAAAGCTTTACCGCGAGGTGAAGAACATTGCACATCACAACAACAAGGCCTTCTTCACCAGAAGAGTGGCAAGGCAATCGTACGACCGCGACATGGAGGTCGATGGCTTTGAGAAGTACACGGCTGCGGCTCGCGAATACAAGAACATGTATGACTTCAAGCTAGGGAGCCTGATGGACTACTATGGCATAGAAACAGAAGCAGAAGTGATCAGTGGCAACATCTTGAAGATGTCGAAATCGTTCAATGAAAGGAAGGACTTGGAAGGAATCAACCATGCTGTGATGTCACTGAGAAAGGAAGCTAGAAGCTGGTTCAATGTGATGAACAAGTCAAATCCTCAAGGTGCATGTGCAATAGCATCAGCTTGGTACCATGTTACATATCATCCTAGGTATTGGGGATCCTACAATCAAGGGCTGAAAAGGGACCATTTCCTCAGTTTTGCATGGTGTGTGCATGACACTCTCATTCAGATAAAGAAGGACAAAGTCAGTCATGGAACTTTTGCTGTGGAGCTTTGGACAATCCTGAAATTGTTCCCCATTTTACTGGAGAGAGAGGAAGAGAAGGGTGAAGGGGAAAACGAGGATCCAAGTGCGGCGCGAAAGGTTCTTAAAGCAGACCGCGAGAAACTCAGAAGGGATCGACTCAACGAACACTTCCAAGAGCTGGGAAACACGTTAGATCCTGATAGACCAAAGAATGACAAGGCAACTATCCTCACTGAGACCATCCAAATACTAAAGGACTTGAACGCTGAAGTTAATAGGCTTAAAATGGAGCATAAAGAACTTTCTGAGGAGTCACGTGAACTAATGCAAGAAAAGAATGAACTTAGAGAAGAGAAGACATCTCTAAAATCTGATATAGAAAATCTCAATGCCCAGTATCAGCAGAGAGTCAGAGTAATGTTCCCATGGACTGCAATTGACCATTCTGTTGTCATTAGTCCACCTTACTCATATCCACTTCCTATACCTATCCCTCCTGCTCCAATTTCCATCCACCCATCTCTTCAACCTTTTCCTTTCTTTGGAAATCAAAACCCCGGTCACATTCCTAATCCTTGTTCAATGTATGTCCCATATTCTACTCCAACTAACCCCCCAGTTGAGCCGCCATCAACGATGTATGCTTCCACATCCCATGCATCAAACCAAAAAGAATCCCGTAGCAAGTCACCAGGTCATAGAAGAAGGTCCAGTGATGCTGAAAGAAGTGGTGAGTCTCACGATGATTGTACTTCTGGAGGAAGGAAGGGAAAGCATTCAGTGACGAAGGATAGAACCGTCATAGGTGGGAGTGCTTCAAGCCATTATTCTTCATCTCAAGGACTTCTAGATAGCTCCAACAGCGTGGGTGACATCCCAAAGACTGATAATTGA | 3717 | 0.4162 | MSKTIQMHGFPSNMSAEEVKKFMEQHTGHQTVHAVEVRQHKEGDPTTTYVDVQFIDRKSVETILLLVTQHLSYSAYVLNASEMKHDILPKPRIFPHNMDDIVVHFGCLTSKDKLSVLWEHPNASVKFGSRLRNIYIFLHYLKMDYKLQISSESISCIELCHSDDLTKKILLFQLRGAPMIYEKDVSKSKYFKEACDNHWFRGVDFTPSCSIGQSSALCFELPQGVEVPKFNQHYRNYNEVDDRIFTLEKHLGFSSSNHNFFPIMIPPEGFNLPYKILFKINSLIQHGCLPVQAIDINLFHLLDPRRVRIEYIESALHKLDQMKECCYEPAQWLEKQYNKYSSNSLVPVSSAISLDDGLVYVHRVKVTPSKIYFCGPEVNLSNRVLRNYPEDTDNFLRVSFVDEDMYKLHSADLVPRSSSTEVDRETKLHERVLSTLKDGIAIGDKKFEFLAFSPSQLRDNSVWMFAPRTGLTASDIRKWMGEFHEIRNVAKYAARLGQSFSSSRETVSVGRHEIEIIPDVEFRRGETKYCFSDGIGKISSELAKEVAEKCGCRDNNIPSAFQIRYGGYKGVVAIDPTSSTKLSLRKSMCKYKSENTKLDVLAWSKYKPCYLNRQVITLLSTLGVKDGVFRKKQREKGRRPHPNECSGSDLDGDIYFVSWDPDLIPPRQENPMDHEPSQVMKVDHDVTLQEVEEYFAHYIVKDRLGIVASAHTVFADKDPERAMSPACIELAKLHSTAVDFAKSGVPAEFPPHLHVEEYPDFMEKPDRQSYQSNSIIGKLYREVKNIAHHNNKAFFTRRVARQSYDRDMEVDGFEKYTAAAREYKNMYDFKLGSLMDYYGIETEAEVISGNILKMSKSFNERKDLEGINHAVMSLRKEARSWFNVMNKSNPQGACAIASAWYHVTYHPRYWGSYNQGLKRDHFLSFAWCVHDTLIQIKKDKVSHGTFAVELWTILKLFPILLEREEEKGEGENEDPSAARKVLKADREKLRRDRLNEHFQELGNTLDPDRPKNDKATILTETIQILKDLNAEVNRLKMEHKELSEESRELMQEKNELREEKTSLKSDIENLNAQYQQRVRVMFPWTAIDHSVVISPPYSYPLPIPIPPAPISIHPSLQPFPFFGNQNPGHIPNPCSMYVPYSTPTNPPVEPPSTMYASTSHASNQKESRSKSPGHRRRSSDAERSGESHDDCTSGGRKGKHSVTKDRTVIGGSASSHYSSSQGLLDSSNSVGDIPKTDN | 1238 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed8g1661 | 1238 | PANTHER | RNA-DEPENDENT RNA POLYMERASE | 636 | 964 | IPR007855 | GO:0003968 | |
| Aed8g1661 | 1238 | SMART | finulus | 984 | 1034 | IPR011598 | GO:0046983 | |
| Aed8g1661 | 1238 | MobiDBLite | consensus disorder prediction | 1167 | 1204 | - | - | |
| Aed8g1661 | 1238 | MobiDBLite | consensus disorder prediction | 1151 | 1166 | - | - | |
| Aed8g1661 | 1238 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 976 | 1048 | IPR036638 | GO:0046983 | |
| Aed8g1661 | 1238 | CDD | bHLH_AtILR3_like | 983 | 1057 | - | - | |
| Aed8g1661 | 1238 | Gene3D | - | 977 | 1061 | IPR036638 | GO:0046983 | |
| Aed8g1661 | 1238 | PANTHER | RNA-DEPENDENT RNA POLYMERASE | 2 | 635 | - | - | |
| Aed8g1661 | 1238 | MobiDBLite | consensus disorder prediction | 1145 | 1238 | - | - | |
| Aed8g1661 | 1238 | Coils | Coil | 1018 | 1073 | - | - |
Showing 1 to 10 of 17 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information