LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed8g1657	ATGGAAACCAGATCGAGAAAATCGAAGCGCCAGCTCGAGCCGGAGCCACCTCTGTTCACCGTTACCAAGAAGCTCCGGCAGAAGGTTCCTCGCCGGCGACGCCAAAACATCTCGCCGGTGCTCCTCGTTCGCATCTCTGCCCATAATCCTCGTTTCTCCGTCGATTCCAGCTCCGGCTCCGACTTCGCCGCCGCCGCTGAGGCCTCGTGCAACTCTAGTAGAGCCTCCGTCGCCGGCAGCGGCAAGCGAAACGCGAACTCGAGAAACGAATTCTCGATCGATTCAACGAGAAATCGGAGATTCGAGAAGCGGAACGAGAACGAAGTGGAGGTGTCGGAGTCTTCGTGCGTGGACTCTGCTCGAAGCAGAAGCTTGATTCTGAAGTTCAAAAGAGAGAGTAAGAATGAGAAGGATAACGACGACGTTTCGGAAGCGTGCACAAAATCTGAGATCACTACTGATCTGAAGTTCAAAAGCGGAAGCGAGAGTAAGAATCGAAAAGAAAACGACGACGTTTCGTGCGCGAAGTCGGAGATTACGAGCGAGGAACAGTTCAATTCAAAGTCCTCCTCTGGTAATAGTACAATTAAAATATCTTCGGAGTCAAACGCGAACGACGTCGTGTCGTTTAGCTCCGGTGTTCGCACGTCGTTTGAAGCGGAAAAGAATAGAAACAAGGAAAACACGAAAAACAGAGCATCAGAATGTGAATACTCTCAAGGTTCTAGAAGCCTCCACGTGGAAGAGAATTGCGCTGACTTAATAGCGCAATCGGTGACGAAGCAGGAATCGGATGCATACGACGCTGTTGTGGATCTCGCTTGCTCCGAGGATCTGCGTTTCTCGTACAGTGACGGTGACGACGACGAAGAATCGGAGTACTGTTCGAGCCAGGGAACTGTGTTCTCTGAATTTCATTCCGAGATTTTCCGCGAATGCTCGCAGCCGGAGCTTTCGGATTATTCTCCGTCGTCGCTGTTTTTGGATTCGGGAAGCCAGTTTTCGGAGGGATCTGTCGGAGAAACTCCTTCTCCGACGTATTTGTTGTTCCTTCAGTACCGCAAGGAGTTCACGGCACTAGTTTCTGCTTCTCTAGTGATTAACGCTTCAAGCGCTGTAGAAGATGTTGTCAATTTTGTTAGATTCGATGATTCGGATGAAGAAGACAGCTACCAGATGCTGCGGAAGAGGGAGAGGAAGCAAGGTTTTGTGATGTCGAATTATGGTGAGAAATATTTCTCTACCACTGAATTCGGAGACACCGTGACTGAGCAACGTGCGCAAATGGTTCAATGGATCATTGAGCAATCTTATCGAAGACAGCTTAGGCAAGAGACAGTGTTTCTTGGAGTCAACCTATTTGACCGTTTCCTAAGTAAAGGATACTTCAAAGCCCAAAGAAGCCTTCAAATTGTTGGAATAGCTTGCCTCACATTAGCGACAAGGATCGAAGAAAACCAGCAATATAACAGAGTGGGGCAAAAAAATTTCTACATAGGAAGCAATGTGTACAGTAGAAGCGAGGTGGTAGCTATGGAATGGGTGGTGCAGGAGGTGCTCAAGTTTCAGTGCTTTCTGCCTACCATCTACAATTTCTTGTGGTATTACCTAAAAGCAGCTAATGCTGATGCAGTCGTTGAGAGGAGGGTCAAGTATCTGGCAGTGCTGGCACTGTCAGGTCATGAGCAACTGTGTTACTGGCCTTCAACAGTTGCTGCAGCACTTGTAATCCTGGCTTGTCTTGAAGTCAATCAAATTTCATCCGTCAAAGTCATAGGGATCCACGTTAGATCAAAAGATGAGAATTTGTATGAATGCATAGAGGTATATGATACTCCTATTTATTGTAATTTGTCAGTGTACTTTTTTCTTTAG	1875	0.4736	METRSRKSKRQLEPEPPLFTVTKKLRQKVPRRRRQNISPVLLVRISAHNPRFSVDSSSGSDFAAAAEASCNSSRASVAGSGKRNANSRNEFSIDSTRNRRFEKRNENEVEVSESSCVDSARSRSLILKFKRESKNEKDNDDVSEACTKSEITTDLKFKSGSESKNRKENDDVSCAKSEITSEEQFNSKSSSGNSTIKISSESNANDVVSFSSGVRTSFEAEKNRNKENTKNRASECEYSQGSRSLHVEENCADLIAQSVTKQESDAYDAVVDLACSEDLRFSYSDGDDDEESEYCSSQGTVFSEFHSEIFRECSQPELSDYSPSSLFLDSGSQFSEGSVGETPSPTYLLFLQYRKEFTALVSASLVINASSAVEDVVNFVRFDDSDEEDSYQMLRKRERKQGFVMSNYGEKYFSTTEFGDTVTEQRAQMVQWIIEQSYRRQLRQETVFLGVNLFDRFLSKGYFKAQRSLQIVGIACLTLATRIEENQQYNRVGQKNFYIGSNVYSRSEVVAMEWVVQEVLKFQCFLPTIYNFLWYYLKAANADAVVERRVKYLAVLALSGHEQLCYWPSTVAAALVILACLEVNQISSVKVIGIHVRSKDENLYECIEVYDTPIYCNLSVYFFL	624

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed8g1657	624	MobiDBLite	consensus disorder prediction	158	202	-	-
	Aed8g1657	624	PANTHER	CYCLINS	1	608	IPR039361	-
	Aed8g1657	624	CDD	CYCLIN	426	513	IPR013763	-
	Aed8g1657	624	PANTHER	CYCLIN-SDS	1	608	-	-
	Aed8g1657	624	Pfam	Cyclin, C-terminal domain	527	608	IPR004367	-
	Aed8g1657	624	CDD	CYCLIN	526	600	IPR013763	-
	Aed8g1657	624	SUPERFAMILY	Cyclin-like	387	523	IPR036915	-
	Aed8g1657	624	Pfam	Cyclin, N-terminal domain	420	523	IPR006671	-
	Aed8g1657	624	MobiDBLite	consensus disorder prediction	1	33	-	-
	Aed8g1657	624	MobiDBLite	consensus disorder prediction	219	233	-	-
	Aed8g1657	624	MobiDBLite	consensus disorder prediction	72	91	-	-
	Aed8g1657	624	ProSitePatterns	Cyclins signature.	426	457	IPR006671	-
	Aed8g1657	624	SUPERFAMILY	Cyclin-like	527	609	IPR036915	-
	Aed8g1657	624	MobiDBLite	consensus disorder prediction	218	238	-	-
	Aed8g1657	624	MobiDBLite	consensus disorder prediction	158	177	-	-
	Aed8g1657	624	SMART	cyclin_7	431	518	IPR013763	-
	Aed8g1657	624	MobiDBLite	consensus disorder prediction	178	202	-	-
	Aed8g1657	624	Gene3D	-	519	612	-	-
	Aed8g1657	624	Gene3D	-	418	518	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed8g1657	Aed-Chr8	21639132	21643693	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed8g1657	420	585	Core Cell Cycle Gene Families	AT5G11300	35.465	3.69e-22	97.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed8g1657	K21777		-	gmx:100817658	917.916