Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1650 ATGTTTCTTCATTGGTGGTCCTTTGTGTGTGTCTTTCTCTTGGTGATTTTGAGATCAGTAGAGGTAGCAAATGCTGATGCTGATGATCAAGCTTATAGAAAAGTTGGAAATAAACTCTTACCTTACTTTTCAATAGTCGTGGATCAATCAGGGCATGGAAACTTCTCCACCATTCAATCTGCCATTGATTCAGTGCCTTCTAACAACAGCTTTTGGGTTTCCATCAAGGTCAAGGCTGGTACCTACAGTGTGACTAAGAATTCATACAACAATCCAATAAATAGTAAACCAAGCACGCCTGCAGTGGCTGCAAGGGTAAGTGGCGACAAGGCATATTTTTTCAGAGTTGGGTTCTTTGGTTTGCAAGACACTTTATGGGACGATGCTGGAAGACATTACTATAAGCTTTGTACCATTCAAGGTGCTGTTGATTTTATCTTTGGTGCTGCCCAATCTTTATTTGAGAGGTGCTCCATATCTGTTATTAGTGGTGCCCTACGTGGCCATCAAGGTTTTATTACAGCACAAGGGAGAATAAATTCAGAAGATGCAAATGGGTTTGTATTCAAAGATTGCCATGTGTTTGGAAACGGGTCAACCTACTTGGGGAGGGCTTGGAGAAACTATGCTAGGGTTTTGTTCTACAAGACCAACATGACCAACATTGTGCAACCTAGGGGTTGGAACTCATGGAATTTTTCTGGGAATGAGTAA 714 0.4146 MFLHWWSFVCVFLLVILRSVEVANADADDQAYRKVGNKLLPYFSIVVDQSGHGNFSTIQSAIDSVPSNNSFWVSIKVKAGTYSVTKNSYNNPINSKPSTPAVAARVSGDKAYFFRVGFFGLQDTLWDDAGRHYYKLCTIQGAVDFIFGAAQSLFERCSISVISGALRGHQGFITAQGRINSEDANGFVFKDCHVFGNGSTYLGRAWRNYARVLFYKTNMTNIVQPRGWNSWNFSGNE 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1650 237 Gene3D - 85 237 IPR012334 -
Aed8g1650 237 Gene3D - 17 84 IPR012334 -
Aed8g1650 237 PANTHER PECTINESTERASE 10-RELATED 88 237 - -
Aed8g1650 237 SUPERFAMILY Pectin lyase-like 44 234 IPR011050 -
Aed8g1650 237 PANTHER PECTINESTERASE 10-RELATED 14 83 - -
Aed8g1650 237 ProSitePatterns Pectinesterase signature 2. 139 148 IPR033131 -
Aed8g1650 237 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 88 237 - -
Aed8g1650 237 Pfam Pectinesterase 99 232 IPR000070 GO:0030599|GO:0042545
Aed8g1650 237 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 14 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1650 Aed-Chr8 21587924 21590117 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1650 6 237 Carbohydrate Esterase AT2G19150 36.620 6.43e-53 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1650 - - gmx:100819252 333.183