Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1649 ATGGGTCTGAGTTTGAAGATGCAGAGCCACCACCATCATCCTGTGGCTTTGAGGTTGCATGATCAAATGGGGTCTAAGAGAAAGTACACTTTCATTCAGGCTCATAGAGCTTGGCTTCCAAAGTTTCTGCTTCTGTGGCTCATGCTAATGGCTTTGATCAGTTGGTGCATCTATAGCAAAATGGATGATGACACTAAAGTCAGAAGGAAAGAGGTTTTGGGTAGCCTCTGTGATCAAAGGGCTAGAATGTTGCAGGATCAGTTTAGTGTTAGTGTTAACCATGTCCATGCCCTTGCCATCCTTGTTTCAACCTTCCATTACTACAGATACCCTTCTGCCATTGACCAGGAAACCTTTGCTGAGTATACAGCCAGGACATTATTTGAACGGCCATTGCTGAGTGGTGTGGCCTATGCACAAAGAGTTGTTAATTCTGAGAGAGAGAGGTTTGAGAAAGAACATGGATGGGTTATAAAGACAATGGAAAGAAAGTCTTCACTGGTTAGAGATGAGTATGCGCCAGTGATATTCGCACAAAAAACTGTCTCATATCTCGAGTCTATTGATATGATGTCTGGGGAGGAGGACCGGGAAAACATTTTACGGGCTAGAGCCACTGGGAAAGCGGTTCTGACTAGCCCTTTCAGGCTGTTGGGTTCTCACAATCTTGGTGTGGTTCTAACATTCCCTGTGTACAAATCTAAGCTCCCTCAGAAACCAACAGTGGAAGAACGCATTGAAGCAACTGCAGGGTATGTTGGAGGATCCTTTGATGTTGAGTCCCTTGTAAAGAATTTACTAGGGCAACTTGATGGTAACCAAAAAATTTTGGTGAATGTATTTGACATTACAAACTATACTAATCCCCTAATCATGTATGGCAACCAATATGAAGTAGGCGATATGTCTCTTGCGCATGTAAGCAAGCTTGATTTCGGAGATCCATACAGGAAACATCAGATGATATGTAGGTACCATCAGAAGGCACCGGCAAATTGGATAGCTCTTACCACGGCATTCCTATTCTTTGTGATTCTTCTTTTAGTCGGTTACATTTTGTACGGTGCTGGAAACCATATTGTCAAAGTCGAAGATGATTTCCATGAAATGCAGGAATTGAAAGTCCTAGCAGAAGCAGCTGATGTTGCCAAGTCCCAGTTTCTAGCTACGGTCTCGCATGAAATTAGAACACCGATGAATGGTATTTTAGGAATGCTTGCTCTGCTTCTAGATACAGAATTGAGTTCTACCCAGCGAGATTACGCTCAGACTGCTCAAGCATGTGGAAAGGCACTGATAACATTGATAAATGAGGTGCTGGACCGTGCTAAAATTGAAGCTGGCAAGTTAGAGCTGGAGGCTGTTCCATTTGATCTTCGTTCCATCATTGATGATCTGGCTGTGTTTGTTTCTGATAAAGTTCCAGATATTGTCATGGGAGATCCTGGGAGATTCAGACAAATAATAACAAATCTCGTTGGCAACTCTGTTAAATTTACTGAACAAGGACATATATTTGTTAAAGTCCATCTGGCAGACAACCGAAAGTCCATTATGAATGGAAAACACGAGACTTTTCTAAACGGGGAATCAGATGAAGTTTTCCATATATCTGGTGATTATCATTTCAAAACCTTGAGTGGACATGAAGCAGCCGATGAACGGAACAGCTGGGATAATTTCAAGCATCTAATCGTTGATGAAGAATACGGCCTCGATTCTTCAAGTGAAACGACAGTGGCTGCTTGCGAATCTTCTGAGCAAGTCACATTGAGGGTGTGTGTGGAGGACACCGGAACTGGAATTCCTTTCTCAGCACAGGATAGTATATTCTTGCCATTCGTGCAGGCTGACAGCTCAACCTCGCGAAACTACGGGGGTACTGGCATAGGCTTGAGTATCAGTAAATGTCTGGTTGAACTAATGGGCGGTCAGATAAACTTCATAAGCCGACCGCAGGTTGGGAGCACCTTTTCTTTTACCGCACTTTGCGGAACGTTTAAGAAGAGTTTAGTTAACGACAACAAGATGAAAAATTTGGAGGATCTGCCTTCAAGTTTTCGAGGGATGAAAGCCGTTGTGGTTGATGGGAAGCCTGTTAGAGCTGCTGTGACTAGATACCATTTGAAGAGACTTGGGATACAAGTTAAAGTTTCAAATAGCATCAGTAAGGCTGTTGCTTTGTGTGGTAAAAGTGGTTCTTTGACATCAGGAATGTTCCAGCCCGATATCATCATGGTTGAGAAGGACACATGGATAACCAGAGAGGATGGCATTTTCAACATATGGAAACAGAACAGCCGGATGTTTAAGATGCCGAAAATGATCCTTCTAGCAACCAACATTACTAATGCCGAGTTCGATAAAGCTAAGGCCACGGGTTTCACCGATACCGTGATCATGAAGCCACTGAGAGCTAGTATGGTGGCTGCTTGTCTTCAGCAAGTTTTGGGGATGGGGAAGAAGCGGCAGCTAGGGAAAGACATGCCTAATGGCTTTCTCCACAGCCTTCTCTATGGAAAGAAAATCTTGGTGGTCGATGACAACGGGGTGAACCGGAGAGTTGCAGCAGGTGCACTAAAGAAGTTTGGAGCTGATGTGAAGTGCGTTGAAAGTGGCAAAGCTGCACTTGAAATGCTGCAGTTGCCTCACAGTTTTGATGCTTGCTTCATGGACATTCAAATGCCAGAAATGGATGGATTTGAAGCAACCAGGCGAATTCGGATGATGGAGAGCAAGGCAAACGAGGAGACAAAGAACAATGGGAGTAGTAAGTGGCACGTGCCTATATTGGCCATGACAGCCGATGTGATCCACGCCACCTATGACAAGTGCTTGAAATGCGGCATGGATGGATACGTCTCGAAGCCATTTGAGGAAGAGAATCTGTACCAGGAAGTTGCAAAGTTTTTCAAATCAAAAAAGGCCGCCACCATCTCAGACTCATCATCATGA 2955 0.4399 MGLSLKMQSHHHHPVALRLHDQMGSKRKYTFIQAHRAWLPKFLLLWLMLMALISWCIYSKMDDDTKVRRKEVLGSLCDQRARMLQDQFSVSVNHVHALAILVSTFHYYRYPSAIDQETFAEYTARTLFERPLLSGVAYAQRVVNSERERFEKEHGWVIKTMERKSSLVRDEYAPVIFAQKTVSYLESIDMMSGEEDRENILRARATGKAVLTSPFRLLGSHNLGVVLTFPVYKSKLPQKPTVEERIEATAGYVGGSFDVESLVKNLLGQLDGNQKILVNVFDITNYTNPLIMYGNQYEVGDMSLAHVSKLDFGDPYRKHQMICRYHQKAPANWIALTTAFLFFVILLLVGYILYGAGNHIVKVEDDFHEMQELKVLAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTELSSTQRDYAQTAQACGKALITLINEVLDRAKIEAGKLELEAVPFDLRSIIDDLAVFVSDKVPDIVMGDPGRFRQIITNLVGNSVKFTEQGHIFVKVHLADNRKSIMNGKHETFLNGESDEVFHISGDYHFKTLSGHEAADERNSWDNFKHLIVDEEYGLDSSSETTVAACESSEQVTLRVCVEDTGTGIPFSAQDSIFLPFVQADSSTSRNYGGTGIGLSISKCLVELMGGQINFISRPQVGSTFSFTALCGTFKKSLVNDNKMKNLEDLPSSFRGMKAVVVDGKPVRAAVTRYHLKRLGIQVKVSNSISKAVALCGKSGSLTSGMFQPDIIMVEKDTWITREDGIFNIWKQNSRMFKMPKMILLATNITNAEFDKAKATGFTDTVIMKPLRASMVAACLQQVLGMGKKRQLGKDMPNGFLHSLLYGKKILVVDDNGVNRRVAAGALKKFGADVKCVESGKAALEMLQLPHSFDACFMDIQMPEMDGFEATRRIRMMESKANEETKNNGSSKWHVPILAMTADVIHATYDKCLKCGMDGYVSKPFEEENLYQEVAKFFKSKKAATISDSSS 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1649 984 SUPERFAMILY CheY-like 840 971 IPR011006 -
Aed8g1649 984 Pfam His Kinase A (phospho-acceptor) domain 383 448 IPR003661 GO:0000155|GO:0007165
Aed8g1649 984 CDD HisKA 383 444 IPR003661 GO:0000155|GO:0007165
Aed8g1649 984 PANTHER TWO-COMPONENT HISTIDINE KINASE 24 975 - -
Aed8g1649 984 Gene3D - 447 666 IPR036890 -
Aed8g1649 984 SUPERFAMILY CheY-like 687 818 IPR011006 -
Aed8g1649 984 SMART CHASE_2 110 295 IPR006189 -
Aed8g1649 984 Pfam CHASE domain 113 293 IPR006189 -
Aed8g1649 984 Pfam Response regulator receiver domain 843 967 IPR001789 GO:0000160
Aed8g1649 984 ProSiteProfiles CHASE domain profile. 110 322 IPR006189 -
Aed8g1649 984 CDD HATPase_EvgS-ArcB-TorS-like 485 662 - -
Aed8g1649 984 Gene3D - 61 113 - -
Aed8g1649 984 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 373 449 IPR036097 GO:0000155|GO:0007165
Aed8g1649 984 PANTHER HISTIDINE KINASE 4 24 975 - -
Aed8g1649 984 Gene3D CHASE domain 114 329 IPR042240 -
Aed8g1649 984 SMART REC_2 841 967 IPR001789 GO:0000160
Aed8g1649 984 ProSiteProfiles Histidine kinase domain profile. 390 661 IPR005467 -
Aed8g1649 984 SMART HKATPase_4 480 666 IPR003594 -
Aed8g1649 984 Gene3D - 685 821 - -
Aed8g1649 984 Gene3D - 836 978 - -
Aed8g1649 984 SMART HisKA_10 383 448 IPR003661 GO:0000155|GO:0007165
Aed8g1649 984 PRINTS Bacterial sensor protein C-terminal signature 609 619 IPR004358 GO:0016310|GO:0016772
Aed8g1649 984 PRINTS Bacterial sensor protein C-terminal signature 650 663 IPR004358 GO:0016310|GO:0016772
Aed8g1649 984 PRINTS Bacterial sensor protein C-terminal signature 626 644 IPR004358 GO:0016310|GO:0016772
Aed8g1649 984 PRINTS Bacterial sensor protein C-terminal signature 591 605 IPR004358 GO:0016310|GO:0016772
Aed8g1649 984 CDD REC_hyHK_CKI1_RcsC-like 843 967 - -
Aed8g1649 984 Gene3D - 357 446 - -
Aed8g1649 984 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 437 661 IPR036890 -
Aed8g1649 984 ProSiteProfiles Response regulatory domain profile. 691 817 IPR001789 GO:0000160
Aed8g1649 984 ProSiteProfiles Response regulatory domain profile. 842 971 IPR001789 GO:0000160
Aed8g1649 984 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 480 662 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1649 Aed-Chr8 21572785 21579935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1649 13 972 Histidine Kinase Gene Family AT2G01830 69.014 0.0 1349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed8g1649 HATPase_c 4.7e-29 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1649 K14489 - gmx:100813204 1790.01