Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1634 ATGACTGTGGATGAAGTGGATAGTAGCTCTGAGTGGAGCAGAGAGCAGGACAAAGCATTTGAAAATGCGTTGGCAACTCATCCGGAGGATGCTTCAGATCGATGGGAGAAGATTGCGGCTGACGTGCTGGGGAAGACTATAGAAGAAATCAAACAGCATTATGAGCTCTTGGTTGAAGATGTTAACCAGATTGAATCCGGTTGCGTGCCTCTTCCGTCTTATAACTCTTCTTCAGAGGGCTCAACAAGCCTTGCTAGTGATGAAGGAGCTGGCAAGAAGGGCAGCGGTCTTGGGCATTGTAACAGTGAGTCTAATCATGGAACAAAGGCTTCAAGATCAGACCAGGAACGGCGAAAGGGGATTGCTTGGACTGAGGATGAACACAGGCAAACAGCAAAAGAGAGGGTCAAGACTCACGAGAGATTGGAAGGACGATTCAAGACAGCAAGGCAGATGTGTGAGAGAGATGGTGTAGATGAAAGATGCATCCATATGCTAAGCTTTAAGCTTTATTTTGTTCAAAAATTTCGAATTGGTTTGAACAGGTTATTTCTTCTGGGCTTGGATAAGTATGGCAAAGGCGACTGGCGAAGCATATCAAGGAACTTTGTGGTGACAAGAACACCAACACAAGTAGCAAGCCATGCTCAAAAGTACTTCATTCGTTTGAACTCGATGAACAAAGATAGAAGGCGATCCAGCATACATGACATCACCAGCGTTAACAATGGAGACATTTCAACACCTCAAGGACCAATAACCGGTCAAACGAACGGTTCTGCCGGAAACTCTACCACCAAAGCAGTCAAAGCAGCCACCCCAGCCTCAACTGGGGTGCCAGGTGTTGGAATATATGCTGCTCCAACCATTGGACAACCAATAGGAGGACCCTTAGTATCAGCTGTTGGCACCCCAGTGAATCTTCCCGCACCTGCACACATGGCATATGGTGTCCGAGCCCCAGTTCCCGGTGCAGTTGTACCTGGTGCGCCGGTAAACATGGTCCCTGTGACGTACCCTATGCCGCATACATCTGCTGTTCCTCACAGGTGA 1053 0.4796 MTVDEVDSSSEWSREQDKAFENALATHPEDASDRWEKIAADVLGKTIEEIKQHYELLVEDVNQIESGCVPLPSYNSSSEGSTSLASDEGAGKKGSGLGHCNSESNHGTKASRSDQERRKGIAWTEDEHRQTAKERVKTHERLEGRFKTARQMCERDGVDERCIHMLSFKLYFVQKFRIGLNRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDISTPQGPITGQTNGSAGNSTTKAVKAATPASTGVPGVGIYAAPTIGQPIGGPLVSAVGTPVNLPAPAHMAYGVRAPVPGAVVPGAPVNMVPVTYPMPHTSAVPHR 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1634 350 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Aed8g1634 350 MobiDBLite consensus disorder prediction 1 35 - -
Aed8g1634 350 CDD SANT 11 58 IPR001005 -
Aed8g1634 350 MobiDBLite consensus disorder prediction 72 132 - -
Aed8g1634 350 Gene3D - 181 226 - -
Aed8g1634 350 SUPERFAMILY Homeodomain-like 180 225 IPR009057 -
Aed8g1634 350 Pfam Myb-like DNA-binding domain 183 220 IPR001005 -
Aed8g1634 350 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Aed8g1634 350 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 180 222 IPR006447 GO:0003677
Aed8g1634 350 CDD SANT 182 220 IPR001005 -
Aed8g1634 350 ProSiteProfiles Myb-like domain profile. 10 58 IPR001005 -
Aed8g1634 350 Gene3D - 5 71 - -
Aed8g1634 350 SMART sant 8 60 IPR001005 -
Aed8g1634 350 SMART sant 182 222 IPR001005 -
Aed8g1634 350 PANTHER TRANSCRIPTION FACTOR KUA1 7 129 - -
Aed8g1634 350 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Aed8g1634 350 MobiDBLite consensus disorder prediction 239 265 - -
Aed8g1634 350 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 182 224 IPR017930 -
Aed8g1634 350 MobiDBLite consensus disorder prediction 8 35 - -
Aed8g1634 350 MobiDBLite consensus disorder prediction 109 132 - -
Aed8g1634 350 PANTHER HOMEODOMAIN-LIKE TRANSCRIPTIONAL REGULATOR-RELATED 181 337 - -
Aed8g1634 350 PANTHER HOMEODOMAIN-LIKE TRANSCRIPTIONAL REGULATOR-RELATED 7 129 - -
Aed8g1634 350 PANTHER TRANSCRIPTION FACTOR KUA1 181 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1634 Aed-Chr8 21406577 21411146 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed8g1634 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1634 - - gmx:100797809 514.612