Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1628 ATGGCGCGCACTCCTAAACCCAAAGGCGGATCCTCCGCCACCACCGCCACCGCCTTCTTCAAACCTGGCACTGCGGTCGAAGTCAGTTCCGAGGACGACGGCTTCCGCGGATCCTGGTTTACCGGCACCGTCATCCGCCGCCTCACCTCCGAGAGGTTCCTAGTCGAATACGACAACCTAATGGCGGAGGACGGGAAAAATCCGAAGAAGTTGAGAGAAGTACTTGGTCTTCGCCACCTCCGGCCTCTTCCCCCGACGGATTCTGATCGAATATTCAAATTCGGCGACGAGGTTGATGCGTTCCACAACGACGGTTGGTGGGAGGGTCACGTAACCCAAGAATTGGAGAATAACAAATTCGCTGTGTATTTCAGAATATCAAAGGAGCAACTCGTCTTTTCCAAAGAGCAACTCAGGCTCCACCGTGAGTGGTTAAATCACGATTGGGTCCCACCACCGCAGCAACAACCACAACAACAGGCACGATTCACTTTAACTTTGTTCTTAATTTGCTGCATTAGAGAGTACTCAAGGATCAGGGGTCATGTTGAATCGAAGAAAGTGTTGTTCACACCGAAAGTGAAGTCTGTTGAAACTGTGAAGGGAAAGGAGATTGGAGTAGGGATGATAGTTGAGGTTAGCAGTGACGAAGATGGGTTCAGTGGAGCGTGGTTTGCTGCCACTGTTGTTGAGGCATTGGGGAATGACAAGTTCCTTGCTGAGTACCATGATCTGCTGGCTGATGATGATTCCCAGCTAAGAGAGGAGATTGATGTTCTGCACATTAGGCCTCATCCGCTGGGTACTGATGTTGATGGTCAATTCAGTCTTCTTGATGAAGTTGATGCTTTCTACAATGATGGTTGGTGGGTCGGTGTGATTGCTAAGGTTCTTACTAATTCAAGGTATGTAGTTTACTTCAGGTCTTCTAACGAAGAACTGGAGTTTGAGCACTCCCAGTTGAGGCTGCACCAGGACTGGATCGGTGGCAAATGGCTCATGCCATGTAAGGTATGGATGTTCAAGTATGCACGTTGGAACTCTCTTTTAAAATTTCTCATAACAGCTTGCACAGTTAAAAGTAGTTAA 1089 0.4848 MARTPKPKGGSSATTATAFFKPGTAVEVSSEDDGFRGSWFTGTVIRRLTSERFLVEYDNLMAEDGKNPKKLREVLGLRHLRPLPPTDSDRIFKFGDEVDAFHNDGWWEGHVTQELENNKFAVYFRISKEQLVFSKEQLRLHREWLNHDWVPPPQQQPQQQARFTLTLFLICCIREYSRIRGHVESKKVLFTPKVKSVETVKGKEIGVGMIVEVSSDEDGFSGAWFAATVVEALGNDKFLAEYHDLLADDDSQLREEIDVLHIRPHPLGTDVDGQFSLLDEVDAFYNDGWWVGVIAKVLTNSRYVVYFRSSNEELEFEHSQLRLHQDWIGGKWLMPCKVWMFKYARWNSLLKFLITACTVKSS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1628 362 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 15 339 - -
Aed8g1628 362 Pfam Agenet domain 208 266 IPR008395 -
Aed8g1628 362 Pfam Agenet domain 95 153 IPR008395 -
Aed8g1628 362 Pfam Agenet domain 279 336 IPR008395 -
Aed8g1628 362 Pfam Agenet domain 23 85 IPR008395 -
Aed8g1628 362 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 15 339 - -
Aed8g1628 362 SMART agenet_At_2 273 329 IPR014002 -
Aed8g1628 362 SMART agenet_At_2 18 88 IPR014002 -
Aed8g1628 362 SMART agenet_At_2 90 146 IPR014002 -
Aed8g1628 362 SMART agenet_At_2 203 270 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1628 Aed-Chr8 21357641 21358862 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1628 215 341 PHD Transcription Factor Family AT5G58610 29.801 7.07e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1628 - - gmx:100805605 557.37