Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1622 ATGGCCGGTAACGGGACCCATTTAGATTCAAAAGCAGCGACTATTGTGATTAAGGATCTGAGATTCACATACCCCGGTATCGACGGCCACCCACCGCCGGGGTCCACTCCCCTCATTCAGGATTTCAATCTCACTCTCTCTTCCGGCCACCGCTGCCTCCTCGTCGGTTCCAACGGCGCTGGGAAGACGACGATTCTGAAGATATTAGGAGGGAAGCACATGGTGGAGCCTCACATGGTTCGCGTGCTCGGAAGATCAGCTTTTCACGACACCACTTTAACCTCTTCTGGCCATCTCTGTTATCTTGGTGGCGAGTGGAGGCGAGATGTTGCTTTTGCGGGTTTTGAGATTCCAATACAAATGGACATATCTGCTCAAAAAATGATATTTGGTGTGTCTGGTATTGATCCTCAAAGAAGAGACGAGTTAATCAAGGTATTAGATATCGATCTTTCCTGGAGATTGCACAAAGTATCTGATGGTCAAAGAAGAAGAGTGCAAATTTGTATGGGTCTCCTCAAGCCATTCAAGGTTCTTCTTCTCGATGAGATAACAGTTGACCTTGATGTTCTAGCAAGAGCTGACCTTCTTACATTTCTAAGAAGGGAATGTGAAGAGAGGGGTGCCACTATTATCTATGCAACACATATATTTGATGGTCTCGAGGATTGGCCAACAAATATTGTTTATGTAGCCCATGGGAAGCTGCAACTAGCAATGCCAATGGACAAAGTCAAAGAAATTAGCAAATTGTCACTAATGAGAACGGTAGAAAGTTGGCTGAGGAAAGAACGAGATGAAGACAGAAAGAAGAGGAAAGAGAGAAAAGAAGCTGGTCTTTCCGAATTTGGAAAGCCAGTTGAGGGAAGCCGTGTAACAGGGGATCCAGCGCGAGCTGCAGTTCGAGTAATTAATAATGGTTGGGCTGCAGGACGATTAAATTCTACCGTTGCTGGCGGGGAAAACTTTCTCCTCAGCTCAAACCGAGTATTGAGGCAGTAG 1002 0.4601 MAGNGTHLDSKAATIVIKDLRFTYPGIDGHPPPGSTPLIQDFNLTLSSGHRCLLVGSNGAGKTTILKILGGKHMVEPHMVRVLGRSAFHDTTLTSSGHLCYLGGEWRRDVAFAGFEIPIQMDISAQKMIFGVSGIDPQRRDELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLTFLRRECEERGATIIYATHIFDGLEDWPTNIVYVAHGKLQLAMPMDKVKEISKLSLMRTVESWLRKERDEDRKKRKERKEAGLSEFGKPVEGSRVTGDPARAAVRVINNGWAAGRLNSTVAGGENFLLSSNRVLRQ 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1622 333 PANTHER ABC TRANSPORTER I FAMILY MEMBER 20 12 332 - -
Aed8g1622 333 MobiDBLite consensus disorder prediction 264 282 - -
Aed8g1622 333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 250 IPR027417 -
Aed8g1622 333 Gene3D - 10 285 IPR027417 -
Aed8g1622 333 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 15 258 IPR003439 GO:0005524
Aed8g1622 333 SMART AAA_5 48 235 IPR003593 -
Aed8g1622 333 Pfam ABC transporter 40 185 IPR003439 GO:0005524
Aed8g1622 333 MobiDBLite consensus disorder prediction 264 292 - -
Aed8g1622 333 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 12 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1622 Aed-Chr8 21315953 21319110 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1622 17 212 Calmodulin-binding Proteins AT2G36910 23.005 7.90e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1622 K12608 - gmx:100782386 605.905