Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1621 ATGGCGGGTAGTTTTATTCCACTCTTGGCCATGGTTTTTGTACAATTGGGCTATGCAGGGATGAATATTACTTCAAAGCTTGCAATACAATCTGGCATGCACCCTCTTGTTCTTGTTGCTTATCGCCAAATTTTTGCCACTATATCCCTTGCTCCCTTCGCTTATTGGTTTGAATGGAAAACGGCTCCCCGAATGACAAAGCGCATTGCGTTCCAGATATTACTGTCTTCCTTAACAGGAGTAACGGGAAATCAGGTACTATATTTCGTGGGGCTTAAATATTCAACAGCTACAATTGCATGTGCCCTAAACAACATGCTTCCAGCATTCACTTTTGTTCTTGCAGTTCTCTTCAGACAAGAGCATTTGAGAATCAAGACGAAGGCCGGGGCAGCGAAGGCCATAGGGACAGTCCTTAGTGTGGGTGGAGCGATCCTTTTGTCATTTTACCATGGAAAAGTCATTAATTTAGGCGAGTCAACGATTCATTGGAGATATGCAGAACAAATGGAAAGAGAAGCCTCTTCTGCAGCAGGTGCTGCTGGAACAAACCTTCTTCTGGGCCCTATCGCCGTAATTGCTAGTGCTCTTGTCTGGGCAATATGGTTCATAGTTCAAGCAAACATGAGCAAGAGCTACCCAGCTCCTTACACAAGCACTTTCTACATGTGTTTCATGGCAAGCATTCAGTGTGTGGCCCTTGCCTTCTATGTTGAACACAATGTCTCAGCTTGGTCACTCCACAGTACCATAAGACTTTCCTCTGCTCTTTATTCGGGGACTATTGCTACTGGGCTAGCATATGTGCTCATGTCGTGGACCATTGAGATGAAAGGTCCTCTCTACGTCTCTGTGTTCTCCCCTTTGCTGCTTATCATCATTGCTGTTCTTAGCTGGGCTCTGCTGCACGAAAAATTATACCTTGGCACTGCCGTAGGGTCTCTGCTGATAGTGTTTGGGCTGTATTTTGTGTTGTGGGGAAAGAACAAAGAGATGAACAATGTTGAAGGCACAGTTGTCCCGGAGACAATAAAGGATGAGGTGAAAGACTTGGAATTGCAATCCTTTGATGCTCCCATCGGTAGCGGTAACCATCGTTAA 1101 0.4523 MAGSFIPLLAMVFVQLGYAGMNITSKLAIQSGMHPLVLVAYRQIFATISLAPFAYWFEWKTAPRMTKRIAFQILLSSLTGVTGNQVLYFVGLKYSTATIACALNNMLPAFTFVLAVLFRQEHLRIKTKAGAAKAIGTVLSVGGAILLSFYHGKVINLGESTIHWRYAEQMEREASSAAGAAGTNLLLGPIAVIASALVWAIWFIVQANMSKSYPAPYTSTFYMCFMASIQCVALAFYVEHNVSAWSLHSTIRLSSALYSGTIATGLAYVLMSWTIEMKGPLYVSVFSPLLLIIIAVLSWALLHEKLYLGTAVGSLLIVFGLYFVLWGKNKEMNNVEGTVVPETIKDEVKDLELQSFDAPIGSGNHR 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1621 366 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020|GO:0016021
Aed8g1621 366 Pfam EamA-like transporter family 8 148 IPR000620 GO:0016020|GO:0016021
Aed8g1621 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 330 - -
Aed8g1621 366 PANTHER WAT1-RELATED PROTEIN 1 338 - -
Aed8g1621 366 PANTHER WAT1-RELATED PROTEIN 1 338 IPR030184 GO:0016021|GO:0022857
Aed8g1621 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1621 Aed-Chr8 21308627 21311411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1621 4 329 Nodulin-like Gene Family AT1G09380 58.589 6.96e-140 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1621 - - gmx:100802059 587.8