Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1612 ATGGGCGGAGGCGGAGCGGCGACGGCGCAAGCGGAGGCGCAGTACTCGACGGCAAAGACGTCGGTGTGGTGGGACATAGAGAACTGCCACGTGCCGAAAGGGTGCGATCCACACGCCATAGCGCAGAACATAAGCTCCGCCCTTGTTCGCATGAACTACTGCGGCCCCGTCTCTATCTCCGCCTACGGCGATACCACTCGCATCACTGCCTCCGTCCAGCACGCCCTCTCCAGCACCGGCATCTCCCTCAACCATGTTCCCGCCGGCGTGAAAGATGCAAGTGACAAAAAGATTCTTGTTGACATGCTTTTCTGGGCAGTGGACAATCCTGCACCTGCTAATTACTTACTAATTTCTGGTGACCCAGACTTCTCCAATGCTCTTCATCAGCTGCGGCTGAGGAGGTATAATATTCTTCTTGCACAACCTCAGAAAGCTTCTGCACCCTTAGTTGCAGCTGCTAAGAGTGTGTGGCTTTGGACTAGTCTCTTGGCTGGAGGATCTCCTCTTATGAATGGTGAAGCACAACAGCAACAGCTTGGTAATTATAACATCCAATCATCTTCTGACTCCTTATCGATCCCAGTCTCTAATTCTGTTCAGATACCACAGCACATGGATTCCTTTTCAGAAGTTTATACTGGAAATCAGAAATTTCCAAATGCAGGAAGGCAACTTGATTCTAGACATCATGGGAAAACGAATGGGAGAAATTCAAGTAAACCAAATGGACCTAAAGCCATGAATCCAGCTCCAGTTGGACTTCAAGAAAATTATAGCAATATAAATTCCTCTGGACCTGGCAACTATACACATAATGCTCCCCCTAAAAATAGATCTACCCCAAATTTCATTCGTGGCAATCCTGATCAAATGCGGGGCAATAATGGTAATCTACAGGCCATTCATCAAAATCCATTTTCACAGCCATTAAGATCAAACTCTTTTCCTTCGCAACCGCCTTTTGTACCAACCATTTCATTTTCTCCAAACCACCAAACTTTTGCAACTTCAGTAGTGCCATCTAGAACTGGTGGGCCCAGCTTCTCTGCAGCACCACTTATGAATTTGCCAGGTATTAGCAATCTGAAAATTTCTGGATATCCTACTAATGCTCAAGATCCACGCCCTGTTAAACAATGGAATGGAGACTTGAAACGGAGTTCTAGCAGTAATGCTCCAAATCATGTAAAGTCAACTGATGAACAAAATGGACATATGGTACAGAACACACAACAATTGTATAACGGCCACCTGCATGGTCCAGAATACCAACCTTCATCATTGACAACTATGGGTAGTAATAACCTTCCTGGTAATGGTATATGGGGATCTCCAGAATGCCCTAAACCTTCTGAATATGTCCAAGGTCTTATAGGGGTTGTTTTACTTGCCTTGAACACACTAAAAACTGAAAAAATTATGCCAACTGAGGATAATATAACAGATTGCATTCGATGTGGAGATCCCAAGCACCGCAACACAGATGTCAAGAAGGCTCTGGATAATGCTATTGAGCAGCAGATGGTGGTGAAGCAGAATGTAGGTGCTTTGCAGTTGTTTGTTGGTAAGAATGGTAGGGTTTGGAAGTGTGTAAGCACTATAGGTGGTAATCCTAATAAGCACTCAAAAGAGACATGGAATGAAATTAAACAATTCCTAACAACTCCTTCTGGAAGATTATCAATAATGGGTACTCAGTGCAAGTATGAAGCAGGTACTGTGATTAAGAATATGTGCTTGAAAAATCATGCTTTGGGTGAAGTCCTACAGATTTTGAACATGATGATTACCTGTAAAAAATGGATTGTGCATCAACAATCTGGCTGGCAACCATTGGCTTTTGGAATGTTATTCTCAAAGCAGAAATGA 1872 0.4396 MGGGGAATAQAEAQYSTAKTSVWWDIENCHVPKGCDPHAIAQNISSALVRMNYCGPVSISAYGDTTRITASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDPDFSNALHQLRLRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGSPLMNGEAQQQQLGNYNIQSSSDSLSIPVSNSVQIPQHMDSFSEVYTGNQKFPNAGRQLDSRHHGKTNGRNSSKPNGPKAMNPAPVGLQENYSNINSSGPGNYTHNAPPKNRSTPNFIRGNPDQMRGNNGNLQAIHQNPFSQPLRSNSFPSQPPFVPTISFSPNHQTFATSVVPSRTGGPSFSAAPLMNLPGISNLKISGYPTNAQDPRPVKQWNGDLKRSSSSNAPNHVKSTDEQNGHMVQNTQQLYNGHLHGPEYQPSSLTTMGSNNLPGNGIWGSPECPKPSEYVQGLIGVVLLALNTLKTEKIMPTEDNITDCIRCGDPKHRNTDVKKALDNAIEQQMVVKQNVGALQLFVGKNGRVWKCVSTIGGNPNKHSKETWNEIKQFLTTPSGRLSIMGTQCKYEAGTVIKNMCLKNHALGEVLQILNMMITCKKWIVHQQSGWQPLAFGMLFSKQK 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1612 623 MobiDBLite consensus disorder prediction 254 295 - -
Aed8g1612 623 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 2 613 - -
Aed8g1612 623 MobiDBLite consensus disorder prediction 366 405 - -
Aed8g1612 623 CDD PIN_limkain_b1_N_like 19 143 - -
Aed8g1612 623 Pfam NYN domain 19 155 IPR021139 GO:0004540
Aed8g1612 623 PANTHER LIMKAIN B LKAP 2 613 IPR024768 GO:0005777|GO:0010468|GO:1903231
Aed8g1612 623 MobiDBLite consensus disorder prediction 214 295 - -
Aed8g1612 623 Gene3D - 10 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1612 Aed-Chr8 21237143 21241454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1612 11 175 C2H2 Transcription Factor Family AT5G61190 75.152 3.21e-79 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1612 - - gmx:100794384 1069.68