Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1600 ATGGCCGGTGACGGTACAGCTACATGCATAGATATCATCCTTGCTATCATCCTGCCCCCTCTTGGAGTCTTTCTCAAATATGGTTGCCAGGTGGAGTTCTGGATTTGTTTGGTGCTGACCCTTTTTGGTTATATACCTGGAATTATCTATGCTGTCTATGCCATCACCAACTTAAGCGAGAGTGGAGTGTGTAGGCTTGTATGTAGTCTCTAG 213 0.4554 MAGDGTATCIDIILAIILPPLGVFLKYGCQVEFWICLVLTLFGYIPGIIYAVYAITNLSESGVCRLVCSL 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1600 70 ProSitePatterns Uncharacterized protein family UPF0057 signature. 13 28 IPR000612 GO:0016021
Aed8g1600 70 PANTHER HYDROPHOBIC PROTEIN RCI2B 5 56 - -
Aed8g1600 70 Pfam Proteolipid membrane potential modulator 9 55 IPR000612 GO:0016021
Aed8g1600 70 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 5 56 IPR000612 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1600 Aed-Chr8 21167127 21168162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1600 5 57 RCI2 Gene Family AT3G05890 77.358 6.45e-26 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1600 - - gmx:100306281 106.301