Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1596 ATGGGCAACCTCTTCTGGCTTTGCATTGTTGCAGCACTTGTCTTCAGCTTCTGGGTTGATGCTTCCTTTTCAGCTTACCAACATCAACACTTCAATGAAACTGAGTTCTCTCTATTGGAGTCTCAAGAACAGGCACATTCGTCCCTTCTTGGGAGGACTCCTCTCATGGTAGGACTCACCCTCATTCAAAGTGCTGCTGCCAAAGGAGCAGTTTGCTTGGATGGGACATTGCCTGGTTATCATCTGCATCGGGGATATGGATCAGGAGCAAACAGCTGGATCGTTAATTTAGAGGGAGGTGGGTGGTGTAATGACGTTAGATCATGTGTTTATCGCAAGAAAACACGGCGTGGATCATCGACATTCATGGAAAAACAGATTCCTTTTACTGGAATTTTGAGCAATAGTGCTGAAGATAATCCAGATTTTTTCAACTGGAACAGAGTGAAAATTCGTTATTGTGATGGTGCTTCTTTTGCCGGGGATGGTGAAGATAAGGCCGCGCAACTGCAATTTAGAGGACAGCGTATTTGGTTGGCTGCAGTGGAAGATTTGATGTCAAAGGGAATGCGATTTGCCAAGCAGACCCTTCTTTCTGGATGCTCGGCTGGTGGTCTTGCTACTATTATACACTGTGATGAATTCAGAGGTTTTTTCCCACAGACCACCAAAGTGAAGTGTCTTAGTGATGCTGGATTATTTCTTGATGCGATTGATGTGTCCAGGGGACATGCCATCAGGGATTTTTTCAGTGGTGTCGTAAGGCTACAGGGAATGCAAAAGAATCTGCCACACATTTGTACTAATCACCTTGATCCCACTTCGTGCTTCTTCCCTCAGAATTTGATTGCCGGTATTAGAACCCCACTATTCATTCTTAATACTGCCTATGACTCATGGCAGATCCAATCAAGCTTAGCTCCTTCTTCAGCAGATCCCCATGGCTTTTGGCATGATTGTAGATTAAATCATGCTAAATGTACTTCTTCACAAATCCAATATTTGCAAGGATTCAGGAATCAAATACTGAATGCTATTAAAGGCTTCTCAAGATCACGGCAGAATGGATTGTTCATAAATTCATGTTTTGCTCACTGCCAATCTGAGAGGCAGGATACATGGTTTGCTGACAATTCTCCTGTCATTGGGAACAAGGCAATTGCCCTGGCTGTTGGAGACTGGTATTTCAACCGAGCAGTTGCTAAGGCCATTGATTGTCCTTACCCTTGTGATAATACATGCCACCATCTTGTCTTCAAATGA 1263 0.4378 MGNLFWLCIVAALVFSFWVDASFSAYQHQHFNETEFSLLESQEQAHSSLLGRTPLMVGLTLIQSAAAKGAVCLDGTLPGYHLHRGYGSGANSWIVNLEGGGWCNDVRSCVYRKKTRRGSSTFMEKQIPFTGILSNSAEDNPDFFNWNRVKIRYCDGASFAGDGEDKAAQLQFRGQRIWLAAVEDLMSKGMRFAKQTLLSGCSAGGLATIIHCDEFRGFFPQTTKVKCLSDAGLFLDAIDVSRGHAIRDFFSGVVRLQGMQKNLPHICTNHLDPTSCFFPQNLIAGIRTPLFILNTAYDSWQIQSSLAPSSADPHGFWHDCRLNHAKCTSSQIQYLQGFRNQILNAIKGFSRSRQNGLFINSCFAHCQSERQDTWFADNSPVIGNKAIALAVGDWYFNRAVAKAIDCPYPCDNTCHHLVFK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1596 420 Pfam Pectinacetylesterase 54 399 IPR004963 GO:0016787
Aed8g1596 420 PANTHER NOTUM-RELATED 4 420 IPR004963 GO:0016787
Aed8g1596 420 PANTHER PECTIN ACETYLESTERASE 4 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1596 Aed-Chr8 21118250 21122939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1596 1 420 Carbohydrate Esterase AT1G57590 66.274 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1596 K19882 - gmx:100810716 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2344 2 26712791 26719752 Aed8g1596 8 21118250 21122939 ECH
Aed8g1596 8 21118250 21122939 Aed2g2344 2 26712791 26719752 ECH
Aed8g1596 8 21118250 21122939 Aed8g1596 8 21118250 21122939 ECH
Aed2g2362 2 26855901 26859531 Aed8g1596 8 21118250 21122939 ECH
Aed6g2214 6 24344109 24350008 Aed8g1596 8 21118250 21122939 ECH
Aed2g2362 2 26855901 26859531 Aed8g1596 8 21118250 21122939 PCT