Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1594 ATGGTAGTAGGTGGCATTGGCGTATGGGGTAATGGGCTAACACAGGCACAGCACGAAAAGCCCATATCGATTACTGAGGATTGCGCGGGAAGCAGTTGGTTCTCTCGTTCTTCTTCTGCCGTCACACGCTACTCTTCCATTCTTCACTTTCTCTGCGAATTTCTATTCCCAAACACATCTCAAATGGGTATTAAGGGTTTAACAAAGCTTTTAGCGGACAATGCTCCAAAGTCCATGAAGGAGAACAAATTCGAGAGCTATTTCGGTCGCAAGATCGCCGTTGACGCTAGCATGAGCATTTACCAGTTCCTTATTGTCGTGGGAAGAAGCGGAACTGAAATGCTCACTAATGAGGCTGGTGAAGTTACCAGATATGTTTTTGATGGGAAGCCGCCAGATTTGAAGAAGCAAGAGCTGGCAAAACGAATTGTTACTTATCAAAAGTTTGTCAACAATGCTTTTCACATGAAAATTGTTAGTTACTCCAAGAGAGCTGAGGCTACTGAAGATTTGTCAGAAGCCTTAGAGACTGCCAGTAAGGAAGACATTGAAAAATTCAGTAAACGTACAGTGAAGGTGACAAAGCAGCATAATGATGACTGCAAAAAACTTTTAAGGCTCATGGGAGTGCCTGTTGTTGAGGCACCCTCAGAAGCAGAGGCTCAGTGTGCTGCTCTTTGCAAAGCTGGAAAGGTTTATGCTGTGGCTTCTGAAGACATGGATTCCTTAACATTTGGAGCTTCTAAATTTCTTCGCCACTTAATGGATCCAAGCTCAAAAAAAATTCCAGTGATGGAATTTGAAGTTGCAAAGATTTTGGAGGGGCTAAAGATGACCATGGACCAATTTATTGACTTATGCATTCTTTCTGGCTGTGATTATTGTGACAGCATTCGAGGGATTGGGGGACAGACAGCTTTGAAACTCATACGTCAACATGGCTCTATTGAGAATATACTGGAGAACATAAACAAAGAGAGGTACCAGATACCAGATAATTGGCCATATCAGGAGGCTCGGCAGCTTTTTAAAGAACCAGTGGTCATAACCGATGAAAAGGAACTTGATCTTAAGTGGTCTGCTCCAGATGAAGAAGGGTTAATAACATTTCTGGTAAATGAGAACGGCTTCAACAGTGATAGAGTGACTAAGGCAATAGAAAAAATTAAAGCGGCAAAGAACAAGGCATCACAAGGCCGAATGGAATCATTTTTTAAGCCAACAGCAAATCCATCTATACCTATCAAACGCAAGGAACCAGAGAATAATGCTAAAGAAACTAACAAAAAGACCAAGGCTGGTGGTGGTAAGAAGACTAAGAAATAG 1326 0.4208 MVVGGIGVWGNGLTQAQHEKPISITEDCAGSSWFSRSSSAVTRYSSILHFLCEFLFPNTSQMGIKGLTKLLADNAPKSMKENKFESYFGRKIAVDASMSIYQFLIVVGRSGTEMLTNEAGEVTRYVFDGKPPDLKKQELAKRIVTYQKFVNNAFHMKIVSYSKRAEATEDLSEALETASKEDIEKFSKRTVKVTKQHNDDCKKLLRLMGVPVVEAPSEAEAQCAALCKAGKVYAVASEDMDSLTFGASKFLRHLMDPSSKKIPVMEFEVAKILEGLKMTMDQFIDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERYQIPDNWPYQEARQLFKEPVVITDEKELDLKWSAPDEEGLITFLVNENGFNSDRVTKAIEKIKAAKNKASQGRMESFFKPTANPSIPIKRKEPENNAKETNKKTKAGGGKKTKK 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1594 441 CDD H3TH_FEN1-Euk 281 349 - -
Aed8g1594 441 SMART HhH_4 280 313 IPR008918 GO:0003677|GO:0003824
Aed8g1594 441 MobiDBLite consensus disorder prediction 395 441 - -
Aed8g1594 441 Gene3D - 282 345 - -
Aed8g1594 441 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 62 432 IPR006084 -
Aed8g1594 441 Gene3D - 71 281 - -
Aed8g1594 441 PANTHER FLAP ENDONUCLEASE 1 62 432 - -
Aed8g1594 441 CDD PIN_FEN1 65 391 - -
Aed8g1594 441 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 278 413 IPR036279 -
Aed8g1594 441 SMART xpgineu 206 278 IPR006086 GO:0004518
Aed8g1594 441 MobiDBLite consensus disorder prediction 418 433 - -
Aed8g1594 441 Pfam XPG N-terminal domain 62 117 IPR006085 GO:0004518
Aed8g1594 441 Hamap Flap endonuclease 1 [fen]. 62 406 IPR023426 GO:0016788
Aed8g1594 441 SUPERFAMILY PIN domain-like 63 293 IPR029060 -
Aed8g1594 441 Pfam XPG I-region 209 293 IPR006086 GO:0004518
Aed8g1594 441 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 283 298 IPR006084 -
Aed8g1594 441 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 205 222 IPR006084 -
Aed8g1594 441 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 89 103 IPR006084 -
Aed8g1594 441 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 226 246 IPR006084 -
Aed8g1594 441 ProSitePatterns XPG protein signature 2. 209 223 IPR019974 GO:0016788
Aed8g1594 441 SMART xpgn3 62 149 IPR006085 GO:0004518
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1594 62 418 Core DNA Replication Machinery Family AT5G26680 77.188 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1594 K04799 - gmx:100792878 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1594 8 21092782 21103263 Aed8g1594 8 21092782 21103263 ECH