Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1575 ATGACAATGAAGAAGAAGCTGCTTCTTTTGGTAGCTATTGAAGTTGCATGCTTGGTTTCTGGGATCTTGTCCTTTGGATCTGAGACACTCTCTGAGCTTTCTTTCTTAGAAAACGATGTCGTCTCAGCAAGGCCAACCTCTTCCTCATCCCAAACTCAACAACCTCAACCTCTTATGGTCGACCTCACTCTCATTCAAGGAGCTGATTCCAAAGGAGCAGTCTGTTTGGATGGAACATTGCCTGGATACCATTTGGATCGTGGATTTGGATCCGGTGCAGATAGTTGGCTTATTCATTTGGAGGGAGGAGGATGGTGTAATACCATCAGAAACTGTGTCTATAGAAAAAACACTCGTCGTGGTTCCTCAAAATACATGGAAAATCAAATACCATTCACAGGAATATTGAGCAGCAAACCTGAAGAAAACCCTGACTTCTTTAACTGGAATAGAGTTAAATTACGGTACTGTGATGGGGCGTCTTTCAGTGGAGATAGTGAAGATGAGTCTGCACAGCTTCAATTTCGAGGACAAAAAATATGGCTAGCAGCAATGGAGGAACTAATGTCCAAAGGAATGCAGAGAGCCGATCAGGCACTTCTCTCTGGTTGCTCTGCGGGTGGTCTAGCATCCATAATACATTGTGATGAGTTCCGGAGCTTGTTTCCAAAATCTTCCAAAGTGAAATGTTTGAGTGATGGAGGTTTTTTTCTTGATGCAATGGATGTATCTGGGGGACGCACACTGCGGAGTCTTTTTGGAGGTGTGTGCTTCTTTCCTCAGAATATGATTGAACATGTTGAGACCCCATTGTTTCTACTCAACGCTGCTTATGATGTGTGGCAGGTCCAAGCCAGTTTAGCCCCGCCTACGGCTGACCACCTTGGTTCTTGGAATGAATGCAAATCGAACCATGCAAATTGTAGCTCATCTCAAATGCAGTTCCTCCAAGCAGACTTCAGAAATCAAATGCTGAGTGACATTAAAGACTTCTCAAGCTCATCTCAAACTGGGCTATTCATAAACTCTTGTTTTGCTCATTGTCAGTCTGAGAGACAGGAGACATGGTTTGCTGATGACTCTCCTCTTATCGAGGACCAGCCAATTGCAGTTGCTGTTGGAGACTGGTATTTTGATCGAGAAGCTGTCAAAGCTGTTGACTGTGCTTACCCGTGTGACAACAGCTGCCATAATCTGGTGTTTAACTTTAAGTAA 1215 0.4395 MTMKKKLLLLVAIEVACLVSGILSFGSETLSELSFLENDVVSARPTSSSSQTQQPQPLMVDLTLIQGADSKGAVCLDGTLPGYHLDRGFGSGADSWLIHLEGGGWCNTIRNCVYRKNTRRGSSKYMENQIPFTGILSSKPEENPDFFNWNRVKLRYCDGASFSGDSEDESAQLQFRGQKIWLAAMEELMSKGMQRADQALLSGCSAGGLASIIHCDEFRSLFPKSSKVKCLSDGGFFLDAMDVSGGRTLRSLFGGVCFFPQNMIEHVETPLFLLNAAYDVWQVQASLAPPTADHLGSWNECKSNHANCSSSQMQFLQADFRNQMLSDIKDFSSSSQTGLFINSCFAHCQSERQETWFADDSPLIEDQPIAVAVGDWYFDREAVKAVDCAYPCDNSCHNLVFNFK 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1575 404 PANTHER NOTUM-RELATED 257 402 IPR004963 GO:0016787
Aed8g1575 404 Pfam Pectinacetylesterase 257 381 IPR004963 GO:0016787
Aed8g1575 404 Pfam Pectinacetylesterase 54 254 IPR004963 GO:0016787
Aed8g1575 404 PANTHER NOTUM-RELATED 4 256 IPR004963 GO:0016787
Aed8g1575 404 PANTHER PECTIN ACETYLESTERASE 4 256 - -
Aed8g1575 404 PANTHER PECTIN ACETYLESTERASE 257 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1575 Aed-Chr8 20974057 20979291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1575 5 403 Carbohydrate Esterase AT3G62060 60.417 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1575 K19882 - gmx:100786972 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2344 2 26712791 26719752 Aed8g1575 8 20974057 20979291 PCT