Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1574 ATGGGAAGACACTCTTGTTGTTACAAGCAGAAGCTTAGAAAGGGTCTTTGGTCTCCTGAGGAGGATGAAAAACTTCTGAGGCATATTACAAAGTATGGTCATGGATGTTGGAGTTCTGTGCCTAAGCAAGCAGGTTTGCAAAGGTGTGGTAAGAGCTGCAGGCTTAGGTGGATCAATTACTTAAGGCCTGATTTAAAGAGAGGAACATTCTCACAAGAAGAAGAAAACCTTATCATTGAACTTCATGCGGTATTAGGAAACAGGTGGTCTCAAATTGCGGCACAGTTGCCGGGGAGGACAGACAATGAAATAAAGAATCTGTGGAACTCTTGCTTGAAGAAGAAACTGAGGCAAAAAGGCATAGACCCTGTCACACATAAGCCACTGTCTGAGGTTGAGAATGGAGAGAAAGCACCAGAAGTGTCCAATGAACTGAACCTCCTGAAATCAGAGAGTTCAAAGTCTGATTCAGCTTCCTATGATCAGCAGAGAACATCAATTTCTCCAAAAACCTATGCACCTGAGATGGATGGTTCTTGCAGCTCCAAGATTGAAAGCAATTTTGTAACCAACAACAACAACTGTTACAACAACAACAAAGACTTGTTTCTAGACAGGTTTATGAGTATGAGTAGTAGTAGTAGTTGCCAGCAGCATCCCTCAGATTTGTTGGGGAATTTTCCAATTCAGATGAGTTATGCAACCAATGAGTGTCTCCCAAATGATTCAAACACTGGTCATTGGTTCAGCCAAACTGGAAGAACTTTTGATATGAACACTGAGTTTCCTTTCAATGCTGCTGCTGCCACTTCTATTAATCCTACGCCTACAACCAACTTGTTTCTTCCAAATTCATTTTCCTACAAGCCTTCACTTGCTGTTGTTAATGTTCCCTCTGGCAATGTTTCCACAGCCTATGGATCCCATTACTGGGGGGAAGCCAGTGCTTCCAACAATAGCTGCAATAGCAATAGCAGCATTAGGAGTAATAGCAGCACAGAGTTGAGAAGTAGCAGCATCTTTTCTTGGGGATTGGCAGATTGTAGCACCTCAACTACTACTAAAGAGGCACAACAAATTCACATGATGGAGAATCATCACACAGAAGAAGCTAAGTGGGATGAGTACCTTCATAACCCTATCTCAATGCTGGCTTCTTCTGTGCAAAACCAAGCTGATGAGTCTTTATTATGCAATGAGATAAAAACATCTATGTCCATGCATTTGGTACCTGCTGATACTTTAGGGGTTATGTTGCCTCATACTCATAGTCATGCCAAGCAGCAAGAACAGTCTCAAACTTCTAGTTTCTTTTCCAAGGACATTCAGAAGCTCAGGGAAGCCTTTGGACACAACATGTAA 1362 0.4207 MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQKGIDPVTHKPLSEVENGEKAPEVSNELNLLKSESSKSDSASYDQQRTSISPKTYAPEMDGSCSSKIESNFVTNNNNCYNNNKDLFLDRFMSMSSSSSCQQHPSDLLGNFPIQMSYATNECLPNDSNTGHWFSQTGRTFDMNTEFPFNAAAATSINPTPTTNLFLPNSFSYKPSLAVVNVPSGNVSTAYGSHYWGEASASNNSCNSNSSIRSNSSTELRSSSIFSWGLADCSTSTTTKEAQQIHMMENHHTEEAKWDEYLHNPISMLASSVQNQADESLLCNEIKTSMSMHLVPADTLGVMLPHTHSHAKQQEQSQTSSFFSKDIQKLREAFGHNM 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1574 453 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aed8g1574 453 PANTHER HOMEODOMAIN-RELATED 1 446 - -
Aed8g1574 453 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Aed8g1574 453 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aed8g1574 453 CDD SANT 17 61 IPR001005 -
Aed8g1574 453 MobiDBLite consensus disorder prediction 149 176 - -
Aed8g1574 453 SMART sant 13 63 IPR001005 -
Aed8g1574 453 SMART sant 66 114 IPR001005 -
Aed8g1574 453 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Aed8g1574 453 Gene3D - 11 67 - -
Aed8g1574 453 PANTHER MYB DOMAIN PROTEIN 55 1 446 - -
Aed8g1574 453 MobiDBLite consensus disorder prediction 123 142 - -
Aed8g1574 453 MobiDBLite consensus disorder prediction 149 172 - -
Aed8g1574 453 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aed8g1574 453 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Aed8g1574 453 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Aed8g1574 453 CDD SANT 69 109 IPR001005 -
Aed8g1574 453 MobiDBLite consensus disorder prediction 123 138 - -
Aed8g1574 453 Gene3D - 69 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1574 Aed-Chr8 20961127 20963205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1574 1 280 MYB Transcription Factor Family AT4G01680 55.872 2.62e-93 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed8g1574 Myb_DNA-binding 2.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1574 K09422 - gmx:100782199 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2342 2 26700014 26702028 Aed8g1574 8 20961127 20963205 PCT