Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1566 ATGGAACAGAAGGTGGAGACAAATGGGATGATGTGTGGTCAACATTTATTGGACCCACGACCATGCATCAAATTAGACTCTCAAGTTGCATCACTTCCAGATGATAAATCTGGTCAACAGGGTCATCCTGATCCTGTAGAAGATGTTGTTGAACAATCGTCCTCACAGAGTTGGGGGTCATCTAAGTTTGAATATTTAGAATCCAAGCCTAGGGAGCTTCCTTTCAAAAAAACCAGGGTTTCAGTGCGTGCAAGATCAGAAGCTCCTCTGATTAGTGATGGATGTCAATGGAGAAAATACGGACAAAAAATAGCGAAGGGTAATCCTTGTCCTCGTGCCTATTATCGTTGCACTATGGCCGTAGGATGTCCGGTTCGTAAGCAGGTGCAAAGATGCACAGAGGACAAGACGGTGCTGATAACAACCTACGAAGGCAATCATAACCATCCACTTCCACCCTCAGCCACATTGATGGCCAATTCCACCTCAGCAGCTGCAGCTATGTTGTTATCTTCTTCATGTTCAACAACATCTAATAACGAAGCACTGAGTAACACTGTAGGATCAGTATTCTCTTCCATGCCCTACAATAATATCCCAATGGCAGCAACCCTCTCAACCTCTGCACCATTTCCCACTATCACCCTTGACATGACCAATTCTACCAACCCTCTAATTCCATTGCATGCAAATGCAACTACCTTTCCTCAGCTATTGGGGCACCCTGTCATCTTCCCCCACAATAAGATGATGCAACAATATTCATTAGGCCAACAACAACAACAACCTTTGTTCATGACGACAACAGAGACAATGAGTGCAAGTGCTATTGCTTCGAATCCAAATTTCACTGTAGCATTAGCAACAGCAATCTCATCAATTATTGGAGGAGCTCCTAGAGGCAATGATGGAAGTGTTCTTCACCTTAATGGGACATCTATGTTGCCTGGATCAACTTAG 960 0.4396 MEQKVETNGMMCGQHLLDPRPCIKLDSQVASLPDDKSGQQGHPDPVEDVVEQSSSQSWGSSKFEYLESKPRELPFKKTRVSVRARSEAPLISDGCQWRKYGQKIAKGNPCPRAYYRCTMAVGCPVRKQVQRCTEDKTVLITTYEGNHNHPLPPSATLMANSTSAAAAMLLSSSCSTTSNNEALSNTVGSVFSSMPYNNIPMAATLSTSAPFPTITLDMTNSTNPLIPLHANATTFPQLLGHPVIFPHNKMMQQYSLGQQQQQPLFMTTTETMSASAIASNPNFTVALATAISSIIGGAPRGNDGSVLHLNGTSMLPGST 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1566 319 Gene3D WRKY domain 76 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed8g1566 319 Pfam WRKY DNA -binding domain 93 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed8g1566 319 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 34 303 IPR044810 GO:0003700
Aed8g1566 319 SUPERFAMILY WRKY DNA-binding domain 84 152 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed8g1566 319 SMART WRKY_cls 91 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed8g1566 319 MobiDBLite consensus disorder prediction 27 55 - -
Aed8g1566 319 PANTHER WRKY TRANSCRIPTION FACTOR 47-RELATED 34 303 - -
Aed8g1566 319 ProSiteProfiles WRKY domain profile. 86 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1566 Aed-Chr8 20896258 20897608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1566 64 295 WRKY Transcription Factor Family AT4G04450 55.159 9.98e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed8g1566 WRKY 2.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1566 - - gmx:100785933 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2334 2 26637928 26640905 Aed8g1566 8 20896258 20897608 PCT