Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1557 ATGAAAGCCAAAATTCTAGGTTCCACGGTTTCTCTCATCCTGGTGGTGGGTGTGGTAATTGCTGTGGTCGCCATAGTTCAAAGCCCAAAAGGCGCCGGCAACAGTGGATCAGGATCAGGAGAAGTGAAAACCCAGAACAAGGCCGTGACATCGTTGTGCCAAGGCTCAGACGACAAGCAACTGTGCCACGATGTGTTGTCCACTGCGAACAGCACAGACCCAAAGGACTACATCGCAACCGTGGTGAAGACCTCCATGGACAGCGTCCTCAAAGCGTTCAACATGAGCGACAAGCTCACGGTTGAACACGGCAACAGCAGTGCCGGGATGAAGATGGCCCTCGAGGATTGCAAGGACTTGTTACAAGCCGCCATCCACGAACTCGAAGCCTCCGGTGTCTTGGTTCAAGAGAGCAGCCTCGACGACGTGCACCAGCGCGCCCCCGAGCTCAAGAACTGGCTCGGAGCCGTTATTGCATACCAGCAATCTTGCCTCGACGGCTTCGACACCGATGGCGAGAAGAAGGTTCAGGAGCAGCTCCATACAGGGAGCTTAGACAGGGTTGGAAAGCTCACCGGCTTGGCTCTCGATGTCGTCTCCGGGATTTCTCACATTCTCCAATCCTTGGACTTAAACCTGGCTCTCAAACCCGCCTCCCGCCGCCTCCTCGAGATTGATCAAGAAGGTTACCCCACTTGGGTCTCCGCCGCTGATCGCAAGCTCTTGGCTCAGCTCGATAACCCTAACAACGGTGGAATTTTGCCTCATGCTACAGTGGCTAAGGATGGAAGCGGCCAATTTACGACTATTATAGATGCTATTAACACTTATCCCAAGAACCACCAAGGTAGATTCATTATCTACGTCAAGGCTGGTGTCTATGACGACTACATTTTGGTTGACAAGAAGAAGCCGAATCTTCTCATCTACGGTGATGGCCCCGACAAGACCATCATCACCGGCCGCAAAAACTTCGCCGAGGGTGTCAAGACAATGAGAACCGCCACCTTCTCCACTGTTGCTGATGATTTCATGGCCAAGTCAATTGCAATCGAGAACACCGCGGGTGCAGAAGGACACCAAGCGGTGGCACTTCGCGTCCAAGGTGATCGTTCGGTGTTCTTCGATTGCGCGTTGCGTGGCTACCAAGACACATTGTATGCCCATGCCCACCGTCAGTACTACCGCAACTGTGAAATCTCTGGAACAATTGATTTCATCTTCGGCTACTCCACCACCTTGATCCAAAACTCGAAGATCGTGGTGAGGAAGCCCATGGCAAATCAACAGAACATAGTGGTGGCAGACGGCACTGGGCAGAAGAACATGCCTACCGGAGTTGTCCTCCAAAACTGTGAGATCATGCCTGATGCGTCTCTTTTCCCTGACCGCTTGACCGTGAAGACTTACTTGGCAAGGCCATGGAAGGCATTCTCAAGGGCAGTGTTCATCGAAAATGTTATGGGTGACTTGATTCATCCAGATGGATATATCCCTTGGAACGATCTTGAACCAAACACACAGGATTGTTACTTCGCGGAGTTTGGCAACACTGGACCGGGTTCCGTTACGCAAGCAAGGGCTAAGTTTGGCAAAGGTCTCATTAGCAAAGTTGAGGCTACGCAATTCACTGCTGAGCCTTGGCTCCAAGCTAGCACTTGGTTGCCTGCCACCGGAGTTGCTTTCGATCCTAGCTTCACCAAAGCTTAA 1710 0.5205 MKAKILGSTVSLILVVGVVIAVVAIVQSPKGAGNSGSGSGEVKTQNKAVTSLCQGSDDKQLCHDVLSTANSTDPKDYIATVVKTSMDSVLKAFNMSDKLTVEHGNSSAGMKMALEDCKDLLQAAIHELEASGVLVQESSLDDVHQRAPELKNWLGAVIAYQQSCLDGFDTDGEKKVQEQLHTGSLDRVGKLTGLALDVVSGISHILQSLDLNLALKPASRRLLEIDQEGYPTWVSAADRKLLAQLDNPNNGGILPHATVAKDGSGQFTTIIDAINTYPKNHQGRFIIYVKAGVYDDYILVDKKKPNLLIYGDGPDKTIITGRKNFAEGVKTMRTATFSTVADDFMAKSIAIENTAGAEGHQAVALRVQGDRSVFFDCALRGYQDTLYAHAHRQYYRNCEISGTIDFIFGYSTTLIQNSKIVVRKPMANQQNIVVADGTGQKNMPTGVVLQNCEIMPDASLFPDRLTVKTYLARPWKAFSRAVFIENVMGDLIHPDGYIPWNDLEPNTQDCYFAEFGNTGPGSVTQARAKFGKGLISKVEATQFTAEPWLQASTWLPATGVAFDPSFTKA 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1557 569 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 200 IPR035513 -
Aed8g1557 569 Gene3D - 252 566 IPR012334 -
Aed8g1557 569 SMART PMEI_2 44 198 IPR006501 GO:0004857
Aed8g1557 569 PANTHER PECTINESTERASE 4 566 - -
Aed8g1557 569 Pfam Plant invertase/pectin methylesterase inhibitor 48 196 IPR006501 GO:0004857
Aed8g1557 569 CDD PMEI-like_3 51 203 - -
Aed8g1557 569 Pfam Pectinesterase 257 551 IPR000070 GO:0030599|GO:0042545
Aed8g1557 569 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Aed8g1557 569 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 203 IPR035513 -
Aed8g1557 569 PANTHER PECTINESTERASE 4 566 - -
Aed8g1557 569 SUPERFAMILY Pectin lyase-like 257 563 IPR011050 -
Aed8g1557 569 TIGRFAM PME_inhib: pectinesterase inhibitor domain 35 177 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1557 Aed-Chr8 20825849 20828094 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1557 1 560 Carbohydrate Esterase AT2G47030 38.870 2.76e-129 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1557 K01051 - gmx:100808559 978.008
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1557 8 20825849 20828094 Aed2g2319 2 26537143 26538861 PCT