Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1553 ATGAAACGGCAAAGGCAAGAAGGACACTCAACGGATATGTTGAGAAAACAAGCATTCATAATTCCGATTCTAATTTCTAATTCAAAGCGAGTCAAGAGCTTCTTCGACTCTTTTATCCTGCGCACTCCTCCCTGCTTATCCTGCGCATCTTTCTCCGGTTTCGGAACCGAGATCCTCCTCTTCACACGCTCACTTTCCACAGTTCTGCACTCTCAATTCCACAATTTTGCTATTTCGTTTCATTTCAGCTGTTGCGAAGAGGATGACCTCCACAAGGCTGCCGAAAATGGAGGACCCTATGTCGTAAAAAATCCAGCAGGGAATGATGGAAATTATCATGCTTCTGAAACTGCAAAGCAGGGCACTCGGCCTGTTAAACCCCAGCCCATTGAAGTTCCTAATATATCAGCAGATGAACTGAAAGAAGTTACAGATAACTATGGTCAAGATTCTCTGATTGGCGAGGGATCCTATGGAAGGGTATATTATGGTGTTCTTAAAAGTGGGCAGGATGCAGCAATCAAGAAGTTGGATGCCAGTAAACAGCCTGATAATGAATTTTTAGCCCAGGTTTCAATGGTATCAAGGCTGAAGCATGAAAATTTTGTTCAATTGCTTGGATATTGCATTGATGGAAGCTCTCGTATTCTTTCTTATGAGTTTGCATCCAATGGGTCTCTTCATGATATTTTACATGGCAAGGTCACTCACTACTTGAGAGATATATTAGTCAAGTCTGCTACACCAAAACTCAGTGAGGATAAAGTCAAGCAGTGTGTTGATACAAGACTAGGAGGAGAATACCCACCCAAAGCTGTTGCTAAGATGGCCGCTGTTGCTGCACTTTGTGTGCAATATGAAGCTGATTTCAGACCAAACATGAGCATTGTAGTCAAAGCTCTTCAACCATTGTTGACTGCACGACCTGGACCTGCTGGTGAAACACCAAATTAA 954 0.4277 MKRQRQEGHSTDMLRKQAFIIPILISNSKRVKSFFDSFILRTPPCLSCASFSGFGTEILLFTRSLSTVLHSQFHNFAISFHFSCCEEDDLHKAAENGGPYVVKNPAGNDGNYHASETAKQGTRPVKPQPIEVPNISADELKEVTDNYGQDSLIGEGSYGRVYYGVLKSGQDAAIKKLDASKQPDNEFLAQVSMVSRLKHENFVQLLGYCIDGSSRILSYEFASNGSLHDILHGKVTHYLRDILVKSATPKLSEDKVKQCVDTRLGGEYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLTARPGPAGETPN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1553 317 Gene3D Phosphorylase Kinase; domain 1 109 221 - -
Aed8g1553 317 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 242 315 - -
Aed8g1553 317 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 82 234 - -
Aed8g1553 317 ProSiteProfiles Protein kinase domain profile. 147 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1553 317 ProSitePatterns Protein kinases ATP-binding region signature. 153 176 IPR017441 GO:0005524
Aed8g1553 317 SUPERFAMILY Protein kinase-like (PK-like) 137 304 IPR011009 -
Aed8g1553 317 Gene3D Transferase(Phosphotransferase) domain 1 223 308 - -
Aed8g1553 317 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 242 315 - -
Aed8g1553 317 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 82 234 - -
Aed8g1553 317 Pfam Protein tyrosine and serine/threonine kinase 151 234 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1553 Aed-Chr8 20809330 20813913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1553 135 234 Receptor kinase-like Gene Family AT5G01950 47.525 6.56e-23 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Aed8g1553 PK_Tyr_Ser-Thr 4.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1553 K13436 - gmx:100808383 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1553 8 20809330 20813913 Aed8g1553 8 20809330 20813913 ECH
Aed2g2313 2 26506521 26510248 Aed8g1553 8 20809330 20813913 PCT