Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1551 ATGGCGACAGAGACATTCCTATTCACCTCTGAATCCGTCAATGAGGGCCACCCTGACAAGCTCTGCGACCAGATCTCCGATGCAGTGCTTGATGCCTGCCTCGAACAGGATCCCGACAGCAAGGTTGCCTGTGAGACATGCACCAAAACCAACATGGTCATGGTCTTTGGAGAGATCACAACCAAAGCCAACGTAGACTACGAGAAGATTGTCCGCAACACGTGCCGCAACATAGGATTTATCTCCGATGATGTTGGTCTCGATGCAGACAAATGCAAGGTGCTGGTCAACATCGAGCAGCAGAGCCCTGATATTGCTCAGGGTGTGCATGGTCACTTCACCAAGCTCCCAGAGGAAGTTGGTGCGGGTGACCAGGGTCACATGTTTGGCTACGCCACCGATGAAACCCCTGAATACATGCCACTGAGCCATGTCCTTGCAACCAAACTAGGAGCACGCCTAACCGAGGTTAGGAAGAACGGAACCTGTGCTTGGTTGAGACCAGATGGGAAGACACAAGTGACCGTAGAGTACTACAATGAGAATGGAGCCATGTTACATGCTAAAAAATAA 573 0.5096 MATETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRNTCRNIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKLPEEVGAGDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMLHAKK 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1551 190 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 3 187 IPR002133 GO:0004478|GO:0005524|GO:0006556
Aed8g1551 190 Gene3D - 121 188 - -
Aed8g1551 190 Pfam S-adenosylmethionine synthetase, central domain 119 180 IPR022629 GO:0004478|GO:0006556
Aed8g1551 190 Pfam S-adenosylmethionine synthetase, N-terminal domain 6 103 IPR022628 GO:0004478|GO:0006556
Aed8g1551 190 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 1 3 187 - -
Aed8g1551 190 ProSitePatterns S-adenosylmethionine synthase signature 1. 121 131 IPR022631 GO:0004478|GO:0006556
Aed8g1551 190 SUPERFAMILY S-adenosylmethionine synthetase 5 111 IPR022636 GO:0004478|GO:0006556
Aed8g1551 190 Gene3D - 15 114 - -
Aed8g1551 190 SUPERFAMILY S-adenosylmethionine synthetase 118 185 IPR022636 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1551 Aed-Chr8 20794524 20795884 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1551 K00789 - gmx:100812341 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1551 8 20794524 20795884 Aed8g1551 8 20794524 20795884 ECH
Aed6g2253 6 24627674 24633715 Aed8g1551 8 20794524 20795884 ECH
Aed8g1551 8 20794524 20795884 Aed2g2312 2 26503032 26504741 PCT