Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1546 ATGGGAAACAACTGTGTTGGATCGAGAACCTCTTATTCTAAAGATGAAACCGATGGCACTTCATGTTCAACTTCACACTGGTGGTCACGAGGACACAAGAAAGATGCTTCTCATCATCATGCACACAAAAAGGGAAAAAAGAACTCAAAAGCCACAGAAGCTGTTCAAAACAAGCCTCCAGAGATAGTGAAAATCGATAGAGAGGATGCAAATCCTCCTCATCAATCCAAAGAGACCACAAAACCACATACAGAAGCAGCAACAACAAAGGATCAGCAGCAGCAGCAGCCGCCAGCGAAACCAAATAAGAAGCCGCCACACAACGTGAAGAAGCTAGCATGTGCAGGCCTCAAGACGGAATCTGTTTTGCAACGTAAAACCGGAAACCTCAAGGAGTTCTACAATCTTGGAACAAAGCTTGGACAAGGCCAATTCGGAACAACTTTCCTTTGTGTGGAGAAGATCACAGGGAAGGAATATGCATGCAAATCAATACTCAAGAGGAAGCTTTTGACAGATGAGGATGTGGAGGATGTGAGGAGGGAGATTCAGATAATGCACCACTTGGTAGGGAGTGCTAATGTGATCAACATCAAGGAGGCTTTTGAGGACAATGTTGCAGTGCATGTTGTGATGGAGCTGTGTTCTGGGGGTGAGTTGTTTGATAGGATTGTGGAGAGAGGGCATTACACTGAAAGAAAGGCTGCTAAGCTTGCAAGGACTATTGTTGGTGTCATTGAGTCTTGCCACTCCCTTGGAGTCATGCATAGGGATCTTAAGCCTGAGAATTTCCTCTTTGTTAATCAGGCAGAGGAATCCCCTCTTAAGGCTATTGATTTTGGATTGTCTGCTTTTTTCAAACCAGGTGAAATTTTTGGTGATGTTGTAGGAAGTCCTTATTATGTAGCACCTGAAGTTCTGCGTAAGCATTATGGCCCTGAAGCAGATGTGTGGAGTGCTGGTGTCATAATCTACATTCTCTTATGTGGGGTGCCTCCATTCTGGGGTGGTCACCCTTGGATTCATGTTGATGGATCAGCACCAGACAAGCCACTTGATTCTGCAGTTTTGAGTCGCATGAAGCAGTTTTATGCAATGAACAAACTCAAGAAAATGGCTCTCAGAGTTATAGCACAGAATCTCTCTGAAGAAGAAATTGCAGGGTTGAAAGAAATGTTTAAGATGATAGACACTGACAACAGTGGCCAAATTACTTTTGAAGAACTCAAGGTTGGACTGAAAAAGTGTGGTGCTAATCTCAATGAATCTGAAATTTACGACCTTATGCAAGCAGCAGATGTTGATAACAGTGGCACAATTGAGTATGGAGAATTCATAGCTGCAACATTGCATTTAAACAAGGTTGACAGGGAAGATCATTTAGTTGCGGCTTTCGCGTATTTCGATAAAGATGGAAGTGGCTACATCACTCAAGATGAGCTTCAACAAGCTTGTGAAGAATTTGGCGTTGAAGATGTCCGCATGGAGGAAATGATCCGAGAAGCTGATCAAGATAATGATGGACGAATAGACTACAACGAATTTGTGGCTATGATGCAGAAAGGAGCTGCAGATATGGGTAAGAGGGGTCGAAAGGGTAGCACTAGTTTTAGAATTGGATTTAGGGAAGCACAACCTGTATGCTAA 1647 0.4323 MGNNCVGSRTSYSKDETDGTSCSTSHWWSRGHKKDASHHHAHKKGKKNSKATEAVQNKPPEIVKIDREDANPPHQSKETTKPHTEAATTKDQQQQQPPAKPNKKPPHNVKKLACAGLKTESVLQRKTGNLKEFYNLGTKLGQGQFGTTFLCVEKITGKEYACKSILKRKLLTDEDVEDVRREIQIMHHLVGSANVINIKEAFEDNVAVHVVMELCSGGELFDRIVERGHYTERKAAKLARTIVGVIESCHSLGVMHRDLKPENFLFVNQAEESPLKAIDFGLSAFFKPGEIFGDVVGSPYYVAPEVLRKHYGPEADVWSAGVIIYILLCGVPPFWGGHPWIHVDGSAPDKPLDSAVLSRMKQFYAMNKLKKMALRVIAQNLSEEEIAGLKEMFKMIDTDNSGQITFEELKVGLKKCGANLNESEIYDLMQAADVDNSGTIEYGEFIAATLHLNKVDREDHLVAAFAYFDKDGSGYITQDELQQACEEFGVEDVRMEEMIREADQDNDGRIDYNEFVAMMQKGAADMGKRGRKGSTSFRIGFREAQPVC 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1546 548 ProSitePatterns EF-hand calcium-binding domain. 397 409 IPR018247 -
Aed8g1546 548 Gene3D Phosphorylase Kinase; domain 1 136 219 - -
Aed8g1546 548 SMART efh_1 460 488 IPR002048 GO:0005509
Aed8g1546 548 SMART efh_1 424 452 IPR002048 GO:0005509
Aed8g1546 548 SMART efh_1 388 416 IPR002048 GO:0005509
Aed8g1546 548 SMART efh_1 494 522 IPR002048 GO:0005509
Aed8g1546 548 MobiDBLite consensus disorder prediction 1 27 - -
Aed8g1546 548 MobiDBLite consensus disorder prediction 60 85 - -
Aed8g1546 548 Pfam EF-hand domain pair 460 520 IPR002048 GO:0005509
Aed8g1546 548 Pfam EF-hand domain pair 389 449 IPR002048 GO:0005509
Aed8g1546 548 ProSiteProfiles Protein kinase domain profile. 134 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1546 548 PANTHER CALCIUM-DEPENDENT KINASE 338 532 - -
Aed8g1546 548 PANTHER CALCIUM-DEPENDENT KINASE 41 336 - -
Aed8g1546 548 CDD EFh 389 448 IPR002048 GO:0005509
Aed8g1546 548 ProSiteProfiles EF-hand calcium-binding domain profile. 420 455 IPR002048 GO:0005509
Aed8g1546 548 PANTHER SERINE/THREONINE-PROTEIN KINASE 338 532 - -
Aed8g1546 548 ProSiteProfiles EF-hand calcium-binding domain profile. 494 525 IPR002048 GO:0005509
Aed8g1546 548 MobiDBLite consensus disorder prediction 32 47 - -
Aed8g1546 548 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 336 - -
Aed8g1546 548 Gene3D Transferase(Phosphotransferase) domain 1 220 346 - -
Aed8g1546 548 ProSitePatterns EF-hand calcium-binding domain. 469 481 IPR018247 -
Aed8g1546 548 ProSiteProfiles EF-hand calcium-binding domain profile. 384 419 IPR002048 GO:0005509
Aed8g1546 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Aed8g1546 548 ProSiteProfiles EF-hand calcium-binding domain profile. 456 491 IPR002048 GO:0005509
Aed8g1546 548 Pfam Protein kinase domain 134 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1546 548 Gene3D - 348 524 - -
Aed8g1546 548 SMART serkin_6 134 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1546 548 ProSitePatterns EF-hand calcium-binding domain. 433 445 IPR018247 -
Aed8g1546 548 ProSitePatterns EF-hand calcium-binding domain. 503 515 IPR018247 -
Aed8g1546 548 MobiDBLite consensus disorder prediction 1 109 - -
Aed8g1546 548 ProSitePatterns Protein kinases ATP-binding region signature. 140 167 IPR017441 GO:0005524
Aed8g1546 548 SUPERFAMILY Protein kinase-like (PK-like) 133 341 IPR011009 -
Aed8g1546 548 SUPERFAMILY EF-hand 380 520 IPR011992 -
Aed8g1546 548 CDD EFh 460 520 IPR002048 GO:0005509
Aed8g1546 548 CDD STKc_CAMK 133 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1546 Aed-Chr8 20765534 20769817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1546 1 542 EF-hand Containing Proteins AT5G04870 61.463 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aed8g1546 Pkinase 2.3e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1546 K13412 - gmx:100783079 914.835