Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1534 ATGGAGAAAGCAAACACATCCCTAGCTCGAACAAAATCCGACCAGCTAGTGGAGTCGATGGTGGCGGCCTTGAAATCGCCACCATCCAGCGATCACTCCGCGAACGGAGTGGTTGAAGGCAGTGCCGGCAGTACCCTCTCAAGAAAGTCGAGCCGACGTCTGATGGGGGCGTCGCCGGGACGCGGCAGCGGGAAGAACACACACATAAGGAAGTCAAGGAGTGCTCAGATAAACCAATTGAAGTTCGAGCTGGATGATGTGAGCAGTGGTGCTGCACTCAGCAGAGCCTCGAGTGCTAGCTTGGGACTCTCTTTCTCATTCACTGGCTTCACTATGCCTCCTGAGGAAATTGCTGACTCCAAACCCTTCAGTGATGATGATATCCCTGAGGATATTGAAGCTGGACCTAGGACAAAGTTTCAAACGGAACCTACTCTACCAATATATCTAAAGTTCACGGATGTCACCTACAAGATAGTGATCAAAGGCATGACAACAACTGAGGAGAAGGAGATCTTGAATGGAATCACTGGTTCTGTAAATCCAGGGGAAGTTTTGGCATTGATGGGTCCCTCGGGAAGTGGAAAGACAACACTTTTAAACCTTCTTGGAGGAAGGATAGGATTTGTTACACAAGATGATGTTCTGTTTCCCCACCTAACTGTGAAAGAGACATTGACATACGCAGCTAGGCTAAGACTACCAAAGACATACACAAAGGAGCAAAAGGAAAAACGAGCTTTAGATGTAATCTATGAGCTTGGCTTGGAGAGGTGCCAAGACACTATGATTGGAGGCTCCTTTGTTCGTGGAGTATCTGGTGGTGAGAGGAAGAGGGTTTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTCTCTTTCTTGATGAACCAACATCTGGTTTGGATTCTACAACAGCCTTGAGGATTGTTCAGATGCTACAAGACATAGCAGAGGCTGGGAAAACAGTGGTGACAACAATCCACCAACCATCAAGCAGACTTTTCCACAAATTTGACAAGTTGATCCTTCTTGGAAAGGGGAGCTTGCTCTACTTTGGAAAAGCATCAGAAGCAATGACTTACTTCCAGTCCATAGGATGTTCACCACTTATATCCATGAACCCAGCAGAGTTTTTGCTAGACCTTGCTAATGGAAACATAAATGATGTTTCCCTACCTTCAGAGTTGGAAGACAAAGTGCAGATGGGAAATGCAGAAGCGGAAACACCAAGTAGCAAACCATCACCAGCAGTTGTACATGAGTATCTGGTGGAGGCATATGACACTCGAGTAGCAGAAGCAGAAAAGAAAAGACTAATGGTTCCTATACCTCTTGATGAAGTAGTGAAGACTAAAGTGTGTTCTCATAAAAGACAATGGGGAGCAAGTTGGAATGAGCAATATTCCATATTGTTTTGGAGAGGAATCAAAGAAAGGAGGCATGACTATTTTAGCTGGTTGAGAATCACCCAAGTTTTGTCCACTGCTGTCATCTTGGGATTACTCTGGTGGCAATCAGATACTAAGAACCCAAAAGATCTGCAAGATCAGGCAGGATTGCTATTCTTCATTGCTGTTTTCTGGGGATTTTTTCCCGTTTTCACTGCAATATTCACATTTCCACAAGAGAGAGCCATGCTGAGTAAGGAGAGAGCAGCAGATATGTACAGATTGAGCGCATACTTCCTGGCTAGAACCACAAGTGACCTTCCACTAGACCTCATTTTACCAGTGCTTTTTCTACTTGTTGTTTATTTCATGGCTGGTCTCAGACTCAGTGTTGCACCATTTTTCCTCACCATTGTCACTGTTTTCCTCTGCATTGTGGCTGCTCAGCAGGGACTTGGACTTGCTATTGGTGCCACACTAATGGACTTGAAAAGAGCAACAACTTTGGCTTCAGTAACTGTGATGACCTTCATGCTAGCTGGAGGATTTTTTGTGCAGAGAGTTCCCATATTTTTTTCATGGATCCGGTACATGTCATTCAACTACCACACCTACAAGCTCTTACTGAAGGTGCAATATGAACACATCTCACCAGTCATCAATGGCATCAGAATTGATCATAGTTGTGCAACAGAGGTTTCTGCTCTAATAGCCATGGTTTTTGGTTACCGTTTCTTGGCATATCTTTCTCTAAGGCGAATGAAACTTCTATCTGGATCTTAA 2175 0.4451 MEKANTSLARTKSDQLVESMVAALKSPPSSDHSANGVVEGSAGSTLSRKSSRRLMGASPGRGSGKNTHIRKSRSAQINQLKFELDDVSSGAALSRASSASLGLSFSFTGFTMPPEEIADSKPFSDDDIPEDIEAGPRTKFQTEPTLPIYLKFTDVTYKIVIKGMTTTEEKEILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTYTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMTYFQSIGCSPLISMNPAEFLLDLANGNINDVSLPSELEDKVQMGNAEAETPSSKPSPAVVHEYLVEAYDTRVAEAEKKRLMVPIPLDEVVKTKVCSHKRQWGASWNEQYSILFWRGIKERRHDYFSWLRITQVLSTAVILGLLWWQSDTKNPKDLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLSKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRLSVAPFFLTIVTVFLCIVAAQQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQRVPIFFSWIRYMSFNYHTYKLLLKVQYEHISPVINGIRIDHSCATEVSALIAMVFGYRFLAYLSLRRMKLLSGS 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1534 724 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 11 207 - -
Aed8g1534 724 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 364 IPR027417 -
Aed8g1534 724 Pfam ABC-2 type transporter 329 389 IPR043926 GO:0140359
Aed8g1534 724 CDD ABCG_EPDR 147 354 - -
Aed8g1534 724 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 11 207 - -
Aed8g1534 724 ProSitePatterns ABC transporters family signature. 272 286 IPR017871 GO:0005524
Aed8g1534 724 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 206 718 - -
Aed8g1534 724 MobiDBLite consensus disorder prediction 26 52 - -
Aed8g1534 724 MobiDBLite consensus disorder prediction 1 73 - -
Aed8g1534 724 Pfam ABC-2 type transporter 467 677 IPR013525 GO:0016020|GO:0140359
Aed8g1534 724 Pfam ABC transporter 205 300 IPR003439 GO:0005524
Aed8g1534 724 SMART AAA_5 182 349 IPR003593 -
Aed8g1534 724 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 206 718 - -
Aed8g1534 724 Gene3D - 149 366 IPR027417 -
Aed8g1534 724 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 150 372 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1534 Aed-Chr8 20619166 20629619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1534 171 386 Calmodulin-binding Proteins AT2G36910 27.869 7.26e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1534 K05681 - gmx:100798801 1291.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1534 8 20619166 20629619 Aed8g1534 8 20619166 20629619 ECH