Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed8g1531 | ATGGCCGAGCCTGGCAATAGTAGTGATGGTGGTGATGGTGACATCAACACTTCTGGAAGCAAGCGCAGAGGCGGTACTGCTTCCAGCCGCACCATGACGACACAAATGGCACAAATTACACAAGATGACGAAGCGATCATGGTGGCTGGATCTTCACCTATGACACCGTGTGGGGCCTGCAAATTCTTGAGGAGGAGGTGCATTGAGGGGTGCATCTTTTCACCCCACTTTGGTACTGACCAGGGTGCAGCCAAGTTTGCAGCTGTTCACAAAGTGTTTGGGGCTAGCAATGTGTCGAAGCTCTTGTCGAACATTGCAATGAACCGCCGCGATGAGGCGGCGGCTACCATAACGTATGAGGCTCAGGCAAGGTTGTCCGATCCAATCTATGGTTGCGTCTCCACCATCCTTACCCTGCAACAACAGGTGGCATCTTTGCAAGCAGAGCTGACTATGTTGCAAACTCAGATGATGAACAGTAGGTTTTCCTATGCAAGTGCACTTCAAACCACACAGCTACAACAACAAAACATGAACGCATCAGCACTACAACCAACATACTCCAACAATTCATGTGCTTCCACTAACTTTCTGAACTTGGGAAGCTTCAACAACAACCCTAGCTTTGATCACCTTCCATTGATGGACACAGCAGCACCCTCATCGAGTTTGGAGCCTCTTCATCAACTCACAAGGTTGTCCCAATATGAGGAAGAGGATCAAGAAGAAAGCAACAAGACTCATCAAGCCTTCAACTATCGCTAA | 765 | 0.4876 | MAEPGNSSDGGDGDINTSGSKRRGGTASSRTMTTQMAQITQDDEAIMVAGSSPMTPCGACKFLRRRCIEGCIFSPHFGTDQGAAKFAAVHKVFGASNVSKLLSNIAMNRRDEAAATITYEAQARLSDPIYGCVSTILTLQQQVASLQAELTMLQTQMMNSRFSYASALQTTQLQQQNMNASALQPTYSNNSCASTNFLNLGSFNNNPSFDHLPLMDTAAPSSSLEPLHQLTRLSQYEEEDQEESNKTHQAFNYR | 254 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed8g1531 | 254 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 20 | 247 | - | - | |
Aed8g1531 | 254 | Coils | Coil | 136 | 156 | - | - | |
Aed8g1531 | 254 | Pfam | Lateral organ boundaries (LOB) domain | 56 | 154 | IPR004883 | - | |
Aed8g1531 | 254 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 20 | 20 | 247 | - | - | |
Aed8g1531 | 254 | MobiDBLite | consensus disorder prediction | 10 | 34 | - | - | |
Aed8g1531 | 254 | ProSiteProfiles | LOB domain profile. | 55 | 157 | IPR004883 | - | |
Aed8g1531 | 254 | MobiDBLite | consensus disorder prediction | 235 | 254 | - | - | |
Aed8g1531 | 254 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed8g1531 | Aed-Chr8 | 20593834 | 20595613 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed8g1531 | 55 | 244 | AS2 family | AT3G03760 | 58.081 | 4.12e-68 | 210 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Aed8g1531 | LOB | 8.7e-37 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed8g1531 | - | - | gmx:100808548 | 332.798 |