Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1501 ATGGCAGTTGCACCTTTACTCTCACGCCGCTTCCTCAAAAAACCGTTTCCTTTCTTCTCCTTCTATCATTATTATTCCTCATGGTCCACCACCACCACCACCTCATCGCCGCCGCCGCCTCCCATCCGAGTCGCGCTCACAGACTCCGTGGGCCGCGCCGTCTTCGCCACTCGCCCTATTGGGGCCGGCGATCTCATCCACACCGCCACCCCCGCCGTCTGCCACCCCTCCTCCTCCTCCGCCCACGCCGTCTGCTACTCCTGCCTCGCCGCGCTCCCCCACTCCCACTCTCAGCGCGTGAGCATTCCCTTTTGCAGCCCACACTGCCACCAACGCTCCAAGGGATATTACGATGCTGAGATGAAAGCAAATTGGGTGGCTTTTAATGACTATTGCTGGACTCGTGGTTTGAAATATCCCTTTCTGGTAAAGCGATTGGCTTGCATGGTCATCTCAGGAGATGCTAGAAGTGACACTCTTGACATACTTCAGCCTGCCAATTTGACTCCTGAAATGGTTTTAGAGATGGAAGAGGAGTTTGTCTTGCTAAGGAATGCCTTCACAAATTCACTTATTGCAGATGAACATATTGCCTTTTTAACTAAGCAATGGTACATCAACATTTTGGCACGAATTCGAATTAATGCATTTCGCCTTGAGTTGGCTGGAGGACTATATGAAGATCTTCTTGCATCAGCAGTTGCATCTGTGGAAGCTGAAGCTGCTGTTGGAAATGCTGTCTATATACTTCCATCCTTCTACAATCATGATTGTGATCCTAATGCACACATTATATGGATAGATAGCGCTGATGCAAAATTGAAGGCACTCCGTGACATTGATGAAGGTGAAGAACTCAGAATCTGCTATATTGATGCCAGCCTGGACTGCAATGCTAGGCGAGAGCTACTGTTTCGAGTGGTTGTGAGGTTGCAAAATTCCCCAAGTGAGTTTCAATTCAGAAATACAGAACTGAGTTTGGCATGTTCCATTCTGCTTCGTGCATTAGTGAAGTCAGAAGACTGA 1026 0.4883 MAVAPLLSRRFLKKPFPFFSFYHYYSSWSTTTTTSSPPPPPIRVALTDSVGRAVFATRPIGAGDLIHTATPAVCHPSSSSAHAVCYSCLAALPHSHSQRVSIPFCSPHCHQRSKGYYDAEMKANWVAFNDYCWTRGLKYPFLVKRLACMVISGDARSDTLDILQPANLTPEMVLEMEEEFVLLRNAFTNSLIADEHIAFLTKQWYINILARIRINAFRLELAGGLYEDLLASAVASVEAEAAVGNAVYILPSFYNHDCDPNAHIIWIDSADAKLKALRDIDEGEELRICYIDASLDCNARRELLFRVVVRLQNSPSEFQFRNTELSLACSILLRALVKSED 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1501 341 CDD SET_SMYD 244 302 - -
Aed8g1501 341 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 47 304 - -
Aed8g1501 341 SMART set_7 40 297 IPR001214 GO:0005515
Aed8g1501 341 Pfam SET domain 51 290 IPR001214 GO:0005515
Aed8g1501 341 SUPERFAMILY SET domain 39 294 IPR046341 -
Aed8g1501 341 ProSiteProfiles SET domain profile. 40 291 IPR001214 GO:0005515
Aed8g1501 341 Gene3D - 84 130 - -
Aed8g1501 341 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD3 47 304 - -
Aed8g1501 341 Gene3D SET domain 53 304 IPR046341 -
Aed8g1501 341 Gene3D - 131 216 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aed8g1501 SET 1.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1501 - - gmx:100801270 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1501 8 20226894 20231209 Aed8g1501 8 20226894 20231209 ECH