Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1499 ATGGGCGTCAATTCGTTGCCATCGGCGGAATCAAACCTCGATCTCGACGAGCAGATCTCGCAGCTCATGCAATGCAAGCCACTCTCTGAACAACAGGTTAGAGCTTTATGTGAGAAGGCTAAGGAGATTTTGATGGATGAAAGTAATGTCCAGCCTGTGAAAAGCCCCGTGACAATTTGTGGTGATATTCATGGGCAGTTTCATGATCTTGCTGAACTATTCCGTATCGGAGGGAAGTGTCCAGATACTAATTACTTGTTTATGGGAGATTATGTGGACCGGGGTTATTATTCAGTTGAAACTGTGACAATCACTCAAGTATATGGATTTTACGATGAGTGCCTCAGAAAGTATGGTAATGCTAGTGTTTGGAAGACCTTTACAGACCTTTTTGATTTCTTTCCATTGACTGCATTGGTTGAGTCAGAAATATTTTGTTTGCATGGTGGGCTTTCACCTTCAATTGAGACTCTTGATAACATAAGGAACTTTGATCGTGTTCAAGAGGTTCCTCATGAAGGGCCCATGTGTGATCTGTTGTGGTCTGACCCAGATGATAGGTGCGGCTGGGGAATTTCTCCTCGTGGTGCTGGATATACATTTGGCCAGGACATATCTGAACAATTTAATCATTCAAACAAGCTTAAGTTAATTGCCAGAGCTCATCAGCTGGTTATGGATGGATTTAACTGGGCTCATGAACAAAAGGTGGTCACCATTTTCAGTGCACCTAACTACTGTTATCGATGTGGGAACATGGCTTCCATTTTGGAGGTTGATGATTCCAAGGGCCACACATTTATCCAGTTTGACCCTGCTCCCAGGAGAGGAGAACCTGATGTCACCCGTAGAACGCCCGATTACTTCCTATGA 873 0.4387 MGVNSLPSAESNLDLDEQISQLMQCKPLSEQQVRALCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTITQVYGFYDECLRKYGNASVWKTFTDLFDFFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHSNKLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDSKGHTFIQFDPAPRRGEPDVTRRTPDYFL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1499 290 Gene3D - 8 290 IPR029052 -
Aed8g1499 290 CDD MPP_PP2A_PP4_PP6 14 274 - -
Aed8g1499 290 SUPERFAMILY Metallo-dependent phosphatases 10 275 IPR029052 -
Aed8g1499 290 PRINTS Serine/threonine phosphatase family signature 56 83 IPR006186 GO:0016787
Aed8g1499 290 PRINTS Serine/threonine phosphatase family signature 214 234 IPR006186 GO:0016787
Aed8g1499 290 PRINTS Serine/threonine phosphatase family signature 236 252 IPR006186 GO:0016787
Aed8g1499 290 PRINTS Serine/threonine phosphatase family signature 85 112 IPR006186 GO:0016787
Aed8g1499 290 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 8 104 - -
Aed8g1499 290 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-4 CATALYTIC SUBUNIT 8 104 - -
Aed8g1499 290 SMART pp2a_7 28 274 IPR006186 GO:0016787
Aed8g1499 290 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 104 290 - -
Aed8g1499 290 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-4 CATALYTIC SUBUNIT 104 290 - -
Aed8g1499 290 MobiDBLite consensus disorder prediction 271 290 - -
Aed8g1499 290 Pfam Calcineurin-like phosphoesterase 56 223 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1499 Aed-Chr8 20195532 20202785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1499 35 220 Calmodulin-binding Proteins AT5G63870 29.762 1.09e-19 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1499 K04382 - gmx:100817449 583.563