Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1478 ATGTTTTCTACTACTAATTATTATTCCCTTATTCTTGCAAGCATTCTCTTGGTGCTAACCCTAACTTTTCCTTCAGAAGCTCAATTGAGTGCAACCTTCTATTCTAGCACATGCTCCAATGTGTCATCTATAGTGAGGAATGCTGTTCAGCAAGCTCTGCAATCTGATTCACGTATTGGTGCAAGCCTCATTCGCCTCCACTTTCATGATTGCTTTGTCAATTCAGGAGGTCCTTCATGGAATGTACTAGTTGGAAGAAGAGATGGTTTAAGTGCGAACCAAGGTGGTGCCAACAGCTCCATTCCCTCTCCATTCGAAAGCCTAGCAAATGTCACTTCCAAATTCTCTAATGTTGGCTTAGACACAACCGATCTCGTTGCATTATCCGGTGCTCACACTTTTGGTCGTGCCCAATGCCAATTCTTCTCCCAAAGGCTATTCAACTTCAGTGGCACAGGAAGCCCAGACCCAACCCTAAACTCAACCTATTTAGCTACTCTACAGCAAAATTGCCCCCAGAGTGGAAATGGGGCTACACTAAACAACCTTGACCCTTCTACCCCTGACACTTTTGACAACAACTATTTCACCAATCTTCTCATCAACCAAGGTCTTCTTCAAACAGATCAAGAACTCCTCTCCACCAATGGATCTTCTACAATCTCCATTGTGAACAACTTTGCCAATAATCAATCGGCTTTCTTTGAAGCGTTTGCAAAGTCAATGATCAACATGGGTAACATTAGCCCTTTGACCGGATCTCAGGGTGAAATTAGAACCGATTGTAAGAAAGTCAATGGAAGTTGA 807 0.43 MFSTTNYYSLILASILLVLTLTFPSEAQLSATFYSSTCSNVSSIVRNAVQQALQSDSRIGASLIRLHFHDCFVNSGGPSWNVLVGRRDGLSANQGGANSSIPSPFESLANVTSKFSNVGLDTTDLVALSGAHTFGRAQCQFFSQRLFNFSGTGSPDPTLNSTYLATLQQNCPQSGNGATLNNLDPSTPDTFDNNYFTNLLINQGLLQTDQELLSTNGSSTISIVNNFANNQSAFFEAFAKSMINMGNISPLTGSQGEIRTDCKKVNGS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1478 268 PANTHER PEROXIDASE 72-RELATED 74 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed8g1478 268 PANTHER PEROXIDASE 72-RELATED 8 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed8g1478 268 ProSitePatterns Peroxidases proximal heme-ligand signature. 124 134 IPR019793 -
Aed8g1478 268 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Aed8g1478 268 ProSiteProfiles Plant heme peroxidase family profile. 13 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed8g1478 268 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed8g1478 268 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed8g1478 268 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed8g1478 268 SUPERFAMILY Heme-dependent peroxidases 28 266 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed8g1478 268 Gene3D - 29 74 - -
Aed8g1478 268 Gene3D Peroxidase, domain 2 102 245 - -
Aed8g1478 268 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed8g1478 268 PRINTS Plant peroxidase signature 210 222 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed8g1478 268 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed8g1478 268 Gene3D - 75 266 - -
Aed8g1478 268 Pfam Peroxidase 74 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed8g1478 268 PANTHER PEROXIDASE 74 267 - -
Aed8g1478 268 PANTHER PEROXIDASE 8 74 - -
Aed8g1478 268 CDD secretory_peroxidase 28 265 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1478 Aed-Chr8 19792456 19795222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1478 13 268 Peroxidase AT5G06720 62.500 3.31e-102 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1478 K00430 - gmx:100782549 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1478 8 19792456 19795222 Aed8g1478 8 19792456 19795222 ECH
Aed4g0363 4 2641645 2643128 Aed8g1478 8 19792456 19795222 PCT