Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1477 ATGAGGATCCGTAAGAGACAAGTGCCTTTCCCTCTCTTGCCGGTGATGACTCACTCATCAGATCCCAACCTGATCAGCCGGTCACCGGTGATGGTGCAACTCAACGATGCCGCCACCAAAGCCTCTTCTTGCACTCATCATGGTCCAACCACTGCGCCCTCACCCCTCTTGGATCTACCTCAGCCGTCTGATCAGCCTCTCCCACCGATCGGGAACCCCACCAACGGCTCTGATGAGACACAGCACAAGAAGCAAGAACAACAAGAAGAGTCTTTGGTGGAAGATGAGAGAAAAGAGAAAGAAGAGGGAGAGGGACAGAAGGGTAATGATACCAGGAAAGGAAGCATCTCGTGTTCAGATTCACCAGCTGAAACATTTTCATCTTCAAGCTCTCCTAAACAAGATGGGAGATGGTGTGAAGGAGATAAAGCTTTTCCACTCAAGAAAAGAAGAGGGGCCTTTGAGAGTGCAACTGAAGATAACAACGACGACAATGATAGTGACAACAACGACAAGAAAATCATTTCTAGGACAAAAACGAGGAAAGTGAAGATGAACAAGAAGTATCCAAGGCAAGACAATGGCGACATAGAAGAAGAGGTAGACAACAATGAATTTGAAGAAGAAGCGATGAGAGAAAAGACGAAATTACCGGAACAAGCAAACGTTGGTAACAAGAAGAGGGTAAGGGGTGGTGCACTAATGGAAGGTTCAAGGTGCAGTCGTGTAAATGGAAGAGGATGGAGGTGTTGTCAACAAACCTTGGTTGGTTACTCTCTTTGCGAGCATCACTTAGGGAAAGGAAGATTGAGAAGCATGACAAGTGTGAGAAACAAGTCCATTGGTACAAGTACAACAACAGCAACAACAAGTATTGCACCAAAGAACAACAACAACAACAACATGCCACAATCCGAAAAGCAAATTACTACTACAACAAAGTCTAGTAGTGAAGACCCTTTGGGAAACAATGATGATGCTGATGAAAACAATGATGACGAGAAGAAGAAGCCAGTGGTTGTTGTCACAAAGAGGAGGATGAAGCTTGGAATGGTGAAGGCTCGATCCATAAGCAGTTTGCTTGGACAAACCAACACTACTAATACTACTACCGAAATTGTTGCTATGGCTGATGAGGATAATAATGATATCAAGTAA 1158 0.4456 MRIRKRQVPFPLLPVMTHSSDPNLISRSPVMVQLNDAATKASSCTHHGPTTAPSPLLDLPQPSDQPLPPIGNPTNGSDETQHKKQEQQEESLVEDERKEKEEGEGQKGNDTRKGSISCSDSPAETFSSSSSPKQDGRWCEGDKAFPLKKRRGAFESATEDNNDDNDSDNNDKKIISRTKTRKVKMNKKYPRQDNGDIEEEVDNNEFEEEAMREKTKLPEQANVGNKKRVRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNKSIGTSTTTATTSIAPKNNNNNNMPQSEKQITTTTKSSSEDPLGNNDDADENNDDEKKKPVVVVTKRRMKLGMVKARSISSLLGQTNTTNTTTEIVAMADEDNNDIK 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1477 385 MobiDBLite consensus disorder prediction 136 158 - -
Aed8g1477 385 MobiDBLite consensus disorder prediction 275 338 - -
Aed8g1477 385 MobiDBLite consensus disorder prediction 79 109 - -
Aed8g1477 385 MobiDBLite consensus disorder prediction 55 69 - -
Aed8g1477 385 PANTHER OS02G0773600 PROTEIN 46 369 - -
Aed8g1477 385 MobiDBLite consensus disorder prediction 110 135 - -
Aed8g1477 385 ProSiteProfiles WRC domain profile. 234 278 IPR014977 -
Aed8g1477 385 MobiDBLite consensus disorder prediction 38 195 - -
Aed8g1477 385 PANTHER - 46 369 IPR031137 GO:0005634|GO:0006351|GO:0032502
Aed8g1477 385 MobiDBLite consensus disorder prediction 275 320 - -
Aed8g1477 385 Pfam WRC 236 276 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1477 Aed-Chr8 19776822 19780585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1477 205 272 GRF Transcription Factor Family AT5G53660 32.099 4.29e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1477 - - gmx:102665471 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1477 8 19776822 19780585 Aed8g1477 8 19776822 19780585 ECH
Aed4g0364 4 2649995 2653046 Aed8g1477 8 19776822 19780585 PCT