Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1474 GCTTGTCCGTGCGTCCGTCATTGTTCATCAGTGTCATCTTATTCCGGTTCTGTGAAGAGGATTTTGAAGAATTTGCACCATGGCAAGCAAGATTTTATAGCAGAAATCACAACCATAGGGAATCTCAACCACAAAAATCTAGTGAAGTTAATAGGGTGGTGCTATGAAAAGGGTGAGATCATCCTTGTGTATGAGTTAATGCAAAATGGTAGCTTAGACAGGTTCATTTTTTCCAAATCTGAAGGGGATTCAACTTTGAGCTGGGAAATTAGGCTTAGTGTTATATGTGGGGTTGCTAGAGCATTGGACTATCTTCACAATGGATGTGACAAAAGAGTGCTACATAGAGACATAAAACCAAGCAATACTTCAATGCTAGGCTTGGAGACCATTCATCTCAGTGAAAAAACTCACCACTCAACAAGGGAAATTGCTGGAACACCAAGGTACATGGCACCGGAAAATTTCCACACCCGAAGGGCTTCGTTTGAAACCGATGTCTATGCATTCGGTGTTCTGATGCTGGAGGTTGCTTGTGGAGGAAGAAAGCCTGAATACAAAGAGGATCTGAGAGATTGTCACAGCATAGTGGACTTGGTTTGGGAGCTCCATTGCAGAGAAAACATAACTGATGCTGTGGATTTTAGGCTCAATGGTGATTTTGATAAGGCTCAGGGCAAGTGTGTGCTTGAGTTGGGGCTAGCATGCTGCCACCCTAACCCATATGAGAGGCCATCAATGAGAAATGTGTTGCAGGTGCTAATAGGAGAAGCAGATCCACCAGTTGTAGCATTTGAGAAACCTGTTTTCACATGGCCAGCTACTGCTCCTCCTGTACTCAATGAGGAGGAGTTGAGTTCACAAGCTACAGTGTCTCAAAATGAACCAATTACAGAACTGATTAGTGGGAGATGA 915 0.435 ACPCVRHCSSVSSYSGSVKRILKNLHHGKQDFIAEITTIGNLNHKNLVKLIGWCYEKGEIILVYELMQNGSLDRFIFSKSEGDSTLSWEIRLSVICGVARALDYLHNGCDKRVLHRDIKPSNTSMLGLETIHLSEKTHHSTREIAGTPRYMAPENFHTRRASFETDVYAFGVLMLEVACGGRKPEYKEDLRDCHSIVDLVWELHCRENITDAVDFRLNGDFDKAQGKCVLELGLACCHPNPYERPSMRNVLQVLIGEADPPVVAFEKPVFTWPATAPPVLNEEELSSQATVSQNEPITELISGR 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1474 304 PANTHER - 17 279 - -
Aed8g1474 304 Gene3D Phosphorylase Kinase; domain 1 10 67 - -
Aed8g1474 304 SUPERFAMILY Protein kinase-like (PK-like) 18 254 IPR011009 -
Aed8g1474 304 ProSiteProfiles Protein kinase domain profile. 1 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1474 304 Pfam Protein kinase domain 17 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1474 304 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 17 279 - -
Aed8g1474 304 Gene3D Transferase(Phosphotransferase) domain 1 68 259 - -
Aed8g1474 304 SMART serkin_6 4 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1474 Aed-Chr8 19710734 19711983 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1474 17 272 Receptor kinase-like Gene Family AT5G55830 43.446 1.31e-65 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed8g1474 Pkinase 2.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1474 - - tcc:108661882 355.14