Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1473 ATGAGCATTTTTGTTTCTACATCAGGAGATTTGAGGTTGAGGACACCAGTGATTATGGTGAATCTAAATCTCTCTACACAGCTTCCGGAAGATATTTTTGTGGGATTTTCAGCTTCCACAGGGGAATATACCCAACTCAACTTTGTAAGATCATGGAATTTCTCTAGCAGGGAGGAGAATAATGAGAAGAATCCCAAGAATCTAACATGGTTATGGATCTTGATTCCAATAGCTGTGGTTGGAGGAGCATGTGGGCTTGCTAGTGCATGCTATTGGAGAAAAATACAGAGAAAGAAACAAGATTTGGAGGAAGATCTGAAAATGGAGCTTGAAATTAAAGGCTCATCTAATGCTCCAGATAAATTTCAGCTTAAGGAACTTATATCTGCCACAAGGAATTTCCACTCATCAAACAAGCTTGGGAAAGGAGGATTTTGGACGGTTTATAAAGGCACCTTAAACGGAAAAGATGTTGCTGTGAAGAGGATTTCAAAGAATTCGCGTCATGGTAAGCAAGATTTTATAGCAGAAATCACAACCATAGGGAATCTCAACCACAAAAACCTAGTGAAGTTAATAGGATGGTGCTATGAAAAGGGTGAGATCCTCCTTGTGTATGAGCTCATGCAAAATGGTAGCTTAGACAGGTTCATTTTTTCCACATCTGGAGGGGATTCAACACTGTTTTGGGAAAGGAGGCTTAGTGTTATACGTGGGATTTCTCGGGCACTGGACTATCTTCACAATGGATGTGCTAAAAGAGTGCTACATAGAGACATAAAACCAAGCAATGTGATGTTGGATTCAGACTTCAATGCTCAGCTTGGAGACTTCGGCTTAGCTCGCACCATTCATCTCAGTGAAAAATCTCACCACTCAACAAGAGAAATTGCTGGAACACCATGGCACCGGAAAGCTTACACACCCAAAGGGCTTCGGTTGAAACTGATGTCTATGCATTTGCATCATGGCAGAGAAAACATAACTGATGCTGTGGATTTGAGACTAAATGGTGATTTTGATAAGGCGCAAGCCAAGTGTGTGTTTGAGTTGGGGTTAGCATGCTGCCATCCTAACCCATATGAGAGGCCATCAACGAGAACTGTGTTGCAGGTGCTGATAGGGGAAGCAGCTCCGCCATTTTTAGCATTGGAGAAACCTGCTTTCACACGGCCAGCCACTGCTCCTGTTCTCAATGAAGAGTTGAAATTCCAAGTAATAATATCCCAAAATGAACCAATAACAGTATTCAATAGTGGGAGATGA 1266 0.4186 MSIFVSTSGDLRLRTPVIMVNLNLSTQLPEDIFVGFSASTGEYTQLNFVRSWNFSSREENNEKNPKNLTWLWILIPIAVVGGACGLASACYWRKIQRKKQDLEEDLKMELEIKGSSNAPDKFQLKELISATRNFHSSNKLGKGGFWTVYKGTLNGKDVAVKRISKNSRHGKQDFIAEITTIGNLNHKNLVKLIGWCYEKGEILLVYELMQNGSLDRFIFSTSGGDSTLFWERRLSVIRGISRALDYLHNGCAKRVLHRDIKPSNVMLDSDFNAQLGDFGLARTIHLSEKSHHSTREIAGTPWHRKAYTPKGLRLKLMSMHLHHGRENITDAVDLRLNGDFDKAQAKCVFELGLACCHPNPYERPSTRTVLQVLIGEAAPPFLALEKPAFTRPATAPVLNEELKFQVIISQNEPITVFNSGR 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1473 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Aed8g1473 421 PANTHER - 16 301 - -
Aed8g1473 421 PANTHER - 323 404 - -
Aed8g1473 421 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 16 301 - -
Aed8g1473 421 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 323 404 - -
Aed8g1473 421 Pfam Protein kinase domain 134 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1473 421 Gene3D Transferase(Phosphotransferase) domain 1 306 380 - -
Aed8g1473 421 SMART serkin_6 134 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1473 421 Gene3D - 1 69 - -
Aed8g1473 421 Gene3D Transferase(Phosphotransferase) domain 1 209 305 - -
Aed8g1473 421 ProSiteProfiles Protein kinase domain profile. 134 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1473 421 Pfam Legume lectin domain 5 67 IPR001220 GO:0030246
Aed8g1473 421 SUPERFAMILY Protein kinase-like (PK-like) 118 373 IPR011009 -
Aed8g1473 421 Gene3D Phosphorylase Kinase; domain 1 103 208 - -
Aed8g1473 421 SUPERFAMILY Concanavalin A-like lectins/glucanases 13 156 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1473 Aed-Chr8 19707793 19709153 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1473 16 390 Receptor kinase-like Gene Family AT5G55830 36.364 2.73e-69 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed8g1473 Pkinase 7.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1473 - - tcc:108661882 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1473 8 19707793 19709153 Aed8g1473 8 19707793 19709153 ECH