Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1470 ATGCACTTCCCTCGGTTAATCAAATACCAATTAGCATCAACAATCTTCATAATCATTTCCCTTACCAAAGTCTCATCCTTTTATTTCAACTTCCCAACCTTCCAAAAACAGAATGAATCAGAGTTATTGCTGAGCAAGAACTCACAAATCTACTTAGATGCAATCCAAGTGACCCCAGATATTCGTGGTCCAATACAGGACTATTCAGGACGTGCTTTTTACAACAAGCCATACAAACTTTGGAGCAAGAAAAAGAACCAAATTGCTTCATTCAACACCACTTTTGTTCTCAAAATCAGGCCCGAAACTACCCCTGGTGGAGAAGGCTTGGCTTTTATCTTAGCCTCAGAAACCACTCTCCCAGAAAACAGTTCAGGACAATGGCTTGGTATTGTGAATGCTACTTCCAATGGAACTTCAAAAGCTGGGATTCTAGCAGTGGAGTTTGACACAAGACAAAGTTCCACAGAAGATGGCCCTGACAACCATGTTGGAATCAACATCAACAGCATCAACTCCATACAACAGAGTCCTTTAATCAACACTGGTGTCAATGTTTCATCAGGTATAAATGTAACATTCAAGATTCAGTACTTCAACGACATAATAACGGTTTTCGGTTCCATGACCGGTTCGGAGGAATTCATGGAGACCCTTTTGGTTTCACAACCTCTTAATCTATCTTCCTATCTTCAAGAGGATGTTTACCTTGGTTTCTCGGCCTCGACGAGTAACTACACGGAGCTGCACTGTGTAAGATCATGGGAATTCAGCGGTGTTGATATTTCAGATGGTGATAAGAAAAAAAGTCTCTTGTGGGTTTATATCACTGTTCCAATAGTGATTATTGTTGTTATCGTAGTTGGGTTGGTGATGCACAGTGTGATACATGGTGTGGCTCAAGCATTGGACTATCTCCACAACGGGTGTGAGAAGAGGGTGCTCCATAGAGACATCAAGGCCAGCAACATAATGTTGGACTCAGACTACAATGCCAAGTTGGGGGATTTTGGTTTGGCTAGAACAATTCAGCAGAGAAATGAAACACATCATTCTACAAAGGAGATAGCAGGAACACCGGGTTACATGGCTCCGGAGACCTTTCTCATGGGACGAGCGACAGTGGAGACGGATGTGTATGCTTTCGGGATCCTCGTGTTGGAGGTTGTGTGTGGAAGGAGGCCTGGGAGTGTGTATGCACAAGATGAGTACAAGAACAGCATTGTGTATTGGGTTTGGGATTTGTATGGTAAGGGAAAAGCAGTTAGTTCTGTTGATGGAAGGTTGAAAAAGGAGGAGATTAAAGAGGAAGAAGTGGAGTGTGTACTTGTTCTTGGATTGGCTTGTTGCCATCCAAATCCACACCAAAGGCCATCAATGAGGACTGTTCTTCAGGTTCTGAATGGAGAAGCACCCCCACCAGAGGTGCCTAAGGAAAGACCAGCTTTTATGTGGCCTGCTATGCCTCCATCTTTCAAAGAAGGTGAAGATTCTTCCCTCATTCAGGGAACACTCACCCCTTTCACTGAAATCACTGGCAGATAA 1545 0.4343 MHFPRLIKYQLASTIFIIISLTKVSSFYFNFPTFQKQNESELLLSKNSQIYLDAIQVTPDIRGPIQDYSGRAFYNKPYKLWSKKKNQIASFNTTFVLKIRPETTPGGEGLAFILASETTLPENSSGQWLGIVNATSNGTSKAGILAVEFDTRQSSTEDGPDNHVGININSINSIQQSPLINTGVNVSSGINVTFKIQYFNDIITVFGSMTGSEEFMETLLVSQPLNLSSYLQEDVYLGFSASTSNYTELHCVRSWEFSGVDISDGDKKKSLLWVYITVPIVIIVVIVVGLVMHSVIHGVAQALDYLHNGCEKRVLHRDIKASNIMLDSDYNAKLGDFGLARTIQQRNETHHSTKEIAGTPGYMAPETFLMGRATVETDVYAFGILVLEVVCGRRPGSVYAQDEYKNSIVYWVWDLYGKGKAVSSVDGRLKKEEIKEEEVECVLVLGLACCHPNPHQRPSMRTVLQVLNGEAPPPEVPKERPAFMWPAMPPSFKEGEDSSLIQGTLTPFTEITGR 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1470 514 Pfam Protein kinase domain 293 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1470 514 SUPERFAMILY Protein kinase-like (PK-like) 293 467 IPR011009 -
Aed8g1470 514 CDD lectin_legume_LecRK_Arcelin_ConA 27 258 IPR001220 GO:0030246
Aed8g1470 514 ProSiteProfiles Protein kinase domain profile. 129 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1470 514 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 258 IPR013320 -
Aed8g1470 514 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 295 502 - -
Aed8g1470 514 Gene3D - 25 272 - -
Aed8g1470 514 SMART serkin_6 230 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1470 514 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 11 292 - -
Aed8g1470 514 PANTHER - 295 502 - -
Aed8g1470 514 Gene3D Transferase(Phosphotransferase) domain 1 291 486 - -
Aed8g1470 514 PANTHER - 11 292 - -
Aed8g1470 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 314 326 IPR008271 GO:0004672|GO:0006468
Aed8g1470 514 Pfam Legume lectin domain 29 268 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1470 Aed-Chr8 19687232 19689250 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1470 295 481 Receptor kinase-like Gene Family AT3G53380 51.042 1.21e-53 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed8g1470 Lectin_legB 2.4e-62 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1470 - - gmx:100785031 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1470 8 19687232 19689250 Aed8g1470 8 19687232 19689250 ECH