Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1469 ATGAAGCTCCCTTGGTTAGTCAAATATCAATTAGCAGCAACCATCTTCATTATCATATCCCTTACCAAAGTTTCTTGCTTTTATTTCAACTTCCCTACCTTCGAAGATGAAAGTAATTTATTGCTGAACAATAATTCAAGGATATTCTCAGCTGCCATCCAAGTGACCCCAGATACGCGTAATCAATCAATAGAAAATTATTCTGGTCGTGCTTTCTACTACAAGCCATACAAACTTTGGAGCAAGAAGAACAACAACCAAATTGCTTCATTCAACACCACTTTTGTTATCAACATCACTCCTCAAACCATCCCTGGTGGAGAAGGCTTGGTGTTTATCTTAGCCTCAGACACCAATCTCCCAGAAAACAGTTCAGGACAATGGCTTGGTATTGTGAATGCTACTTCCAATGGAACTTCAAAAGCTGGGATTCTAGCAGTGGAGTTCGACACAAGACAAAGTTCCACAGAAGATGGCCCTGACAACCATGTTGGAATCAACATCAACAGCATCAACTCCATCCAACAGGTTCCATTTATCAATCTTTCATCAGGTGAACATATCAAAATTCGCATTCAGTACTTAAACAACACAATATCGGTTTTTCGTGGCACGGAAGAAGCTTCAGAAGAATCCATGCAGACCCTTTTGGTTTCTCAACCTCTTAATCTATCTTTTCTTCCAGAAGAGGTTTACCTTGGTTTCTCAGGCTCAACGAGTAACTACACGCAGCTGAACTGTGTAAGATCATGGGAATTCAGTGGTGATGATATTTCAGATGATAAAAAAAGTCTCTTGTGGGTTTATATCACTGTTCCAATAGTGATTGCTATTGTTATCATTGTTGGTGTGATACATGGTGTGGCTCAAGCATTGGACTATCTCCACAACGGGTGTGATAAGAGGGTGCTTCATAGAGACATCAAGGCCAGCAACATAATGTTGGACTCAGACTACAATGCCAAATTGGGGGATTTTGGCTTGGCTAGGACAATTCAGCAGAGAAATGAAACACATCACTCTACAAAAGAGATTGCAGGAACACCGGGTTACATGGCTCCGGAGACCTTTCTCACGGGACGAGCGACGGTGGAGACGGATGTGTATGCATTCGGGGTTCTCGTGTTGGAGGTTGTGTGTGGAAGGAGGCCGGGGAAGGTGAATGCACAAGATGAGTACAAGAACAGCATTGTGTATTGGGTTTGGGACTTGTATGGGAAGGGGAAAGCAGTTAGTTGTGTTGATGGAAGGTTGAAAAAGGAGGAGATCAAAGAGGAGGAAGTGGAGTGTGTACTTGTTCTTGGATTGGCTTGTTGCCATCCAAATCCACACCAAAGGCCATCAATGAGGACTGTTCTTCAGGTTCTAAATGGGGAAACACCCCCACCTGAGGTGCCTAAGGAAAGACCAGCTTTTATGTGGCCTGCTATGCCTCCTTCCTTCAAAGAAGGTGAAGATAACTCCCTCATTCAGGGAACACTCACTCCATTCACTGAAATCACTGGTAGATGA 1512 0.4319 MKLPWLVKYQLAATIFIIISLTKVSCFYFNFPTFEDESNLLLNNNSRIFSAAIQVTPDTRNQSIENYSGRAFYYKPYKLWSKKNNNQIASFNTTFVINITPQTIPGGEGLVFILASDTNLPENSSGQWLGIVNATSNGTSKAGILAVEFDTRQSSTEDGPDNHVGININSINSIQQVPFINLSSGEHIKIRIQYLNNTISVFRGTEEASEESMQTLLVSQPLNLSFLPEEVYLGFSGSTSNYTQLNCVRSWEFSGDDISDDKKSLLWVYITVPIVIAIVIIVGVIHGVAQALDYLHNGCDKRVLHRDIKASNIMLDSDYNAKLGDFGLARTIQQRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEVVCGRRPGKVNAQDEYKNSIVYWVWDLYGKGKAVSCVDGRLKKEEIKEEEVECVLVLGLACCHPNPHQRPSMRTVLQVLNGETPPPEVPKERPAFMWPAMPPSFKEGEDNSLIQGTLTPFTEITGR 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1469 503 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 5 282 - -
Aed8g1469 503 Pfam Protein kinase domain 284 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1469 503 SMART serkin_6 226 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1469 503 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 254 IPR013320 -
Aed8g1469 503 Gene3D - 25 266 - -
Aed8g1469 503 CDD lectin_legume_LecRK_Arcelin_ConA 27 254 IPR001220 GO:0030246
Aed8g1469 503 Gene3D Transferase(Phosphotransferase) domain 1 276 475 - -
Aed8g1469 503 ProSiteProfiles Protein kinase domain profile. 97 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1469 503 Pfam Legume lectin domain 29 263 IPR001220 GO:0030246
Aed8g1469 503 SUPERFAMILY Protein kinase-like (PK-like) 280 456 IPR011009 -
Aed8g1469 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Aed8g1469 503 PANTHER - 283 494 - -
Aed8g1469 503 PANTHER - 5 282 - -
Aed8g1469 503 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 283 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1469 Aed-Chr8 19666801 19668804 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1469 284 470 Receptor kinase-like Gene Family AT3G53380 50.521 2.82e-54 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed8g1469 Lectin_legB 9.5e-60 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1469 - - gmx:100788762 408.683