Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1463 ATGTTTTCGTGGTTGGCAAGGATAGTGTCGGCGTGCTTGAGACCGGTGGTGCGGCGATATGCGCGGATGAGCAAGGACGACGTCGATGACGTGTCCACCGTTGGCGACGCGCTCGTGTGGGGGAAGGACCTCGAGAAGCACTCGTGCGGCGAATTCTCCTACGCCGTCGTTCAGGCCAACGAGGTCATCGAGGATCACAGCCAGGTCGAGACCGGCTCCGACGCCGTCTTCGTCGGCGTCTACGACGGTCACGGTGGCGCCGAAGCCTCGCGCTTCATCAACGATCACCTCTTCGTTAATCTCATCAGGGTTGCACAAGAAAATGGTTCTATCACTGAAGATATTATCAGAAATGCTGTTTCTGCTACTGAGGACGGGTTTCTGACACTTGTTCGAAGAAGTTATGGAATAAAGCCATTGATAGCAGCAATGGGTTCCTGTTGTCTGGTTGGTGTTGTCTGGAAAGGGACGCTATATATTGCGAATCTCGGAGATTCTCGTGCGGTAATCGGTTCTGTAGTTAGATCTAACAAGATCGTTGCTGAGCAGTTGACCAATGAGCACAATGCTTGCAAAGAGGAGGTTAGACGAGAACTCAGGTCTTTGCATCCAGAAGATTCACAAATTGTAGTTATGAAACAAGGAACCTGGCGCATTAAAGGCATCATCCAGGTATCCAGATCCATAGGAGATGCATATTTGAAACGACCAGAGTTCTCATTTGATCCGTCATTCCCACGGTTCCACCTGCCCGAACCTATCCGCCGGCCTGTGCTAACCGCGGAACCATCCATATGTTCAAGGGTTTTAAGACCTAATGATAAGTTCATTATCTTTGCATCTGATGGACTTTGGGAACACTTGACAAACCAGGAAGCTGCCGAGATTGTTCATAAATATCCACGAACTGGGATTGCAAGAAGACTTCTTAAGGCGGCTTTAGACGAGGCAGCTAGGAAAAGGCAAATGAGATATAGAGACCTTCAGAAGATTGGAAAGGGGATTAGGCGTTTCTTCCATGACGATATCACCGTGGTTGTTATCTTCATTGACCATGAGTTGCGTGGCAAGAATCTTACAGTTCCTGAGTTGTCCATCAAAGGGTTTATTGACACAGTTGGATCATCAAAGTTTAGAAATTTGCGGGGATTGGAATGA 1158 0.4836 MFSWLARIVSACLRPVVRRYARMSKDDVDDVSTVGDALVWGKDLEKHSCGEFSYAVVQANEVIEDHSQVETGSDAVFVGVYDGHGGAEASRFINDHLFVNLIRVAQENGSITEDIIRNAVSATEDGFLTLVRRSYGIKPLIAAMGSCCLVGVVWKGTLYIANLGDSRAVIGSVVRSNKIVAEQLTNEHNACKEEVRRELRSLHPEDSQIVVMKQGTWRIKGIIQVSRSIGDAYLKRPEFSFDPSFPRFHLPEPIRRPVLTAEPSICSRVLRPNDKFIIFASDGLWEHLTNQEAAEIVHKYPRTGIARRLLKAALDEAARKRQMRYRDLQKIGKGIRRFFHDDITVVVIFIDHELRGKNLTVPELSIKGFIDTVGSSKFRNLRGLE 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1463 385 PANTHER ALPHABET, ISOFORM E-RELATED 6 370 - -
Aed8g1463 385 SUPERFAMILY PP2C-like 56 351 IPR036457 -
Aed8g1463 385 Pfam Protein phosphatase 2C 69 318 IPR001932 -
Aed8g1463 385 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 6 370 - -
Aed8g1463 385 CDD PP2Cc 52 350 IPR001932 -
Aed8g1463 385 ProSitePatterns PPM-type phosphatase domain signature. 77 85 IPR000222 GO:0043169
Aed8g1463 385 SMART PP2C_4 45 348 IPR001932 -
Aed8g1463 385 Gene3D - 35 358 IPR036457 -
Aed8g1463 385 ProSiteProfiles PPM-type phosphatase domain profile. 48 350 IPR001932 -
Aed8g1463 385 Coils Coil 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1463 Aed-Chr8 19560995 19566232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1463 1 378 PP2C-type Phosphatase Gene Family AT5G06750 69.409 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1463 K01102 - gmx:100778238 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1463 8 19560995 19566232 Aed8g1463 8 19560995 19566232 ECH
Aed4g0371 4 2690518 2694879 Aed8g1463 8 19560995 19566232 PCT