Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1448 ATGAACGAAAACAGGATTGATTGTGTTGGACGGATTCAACAAAGCTATGGTCTAAATGGTGACTTGAACTCTGAGTTTGGAAATTGTTCAAGTCAATGTTTTGATATGAGACAGGCTTCAAATATGGGAAGTGGAGGAGGAGTGGAACAGGAACCATTCATCATAGGCCAAACCAAATCATCATCTAACAGCATTATAAGCCGTTTCGAGTCACCAGCTTCAGCCTTCTATGCAACAGAAATTTGCATGGGATTTCAACAATATGATAGCCAAATTGGTACTAATTCCTCTTTGATGATGTCTCAATTCTCTAAGTTTAGTGATATGGAATTCCCTTTGTATCAATCTCCCAAGCAAAACCTTTTCATGGCTTCATTAGCAAACCAACCTCCCCCCAACTTTGACTTGTCAAATCCTTTGCAAGAAATGCTCAAATCCCATTTGAATAGTGATCAATGTGTTGGATCTTCTGAAAAAACTAGTAAAATCCCATGTGGGGATTTCCCTGGCAGCAATTTTCTTCCAATTGAACAACATAAGTTGTTCATTGATGATAGTAGAAGCCCTTCAATTCCTTCTAAAGGAAATCAGGATCAAATAGTTTCCTGTGGCTCATTCAATTTACCTGCTGCACAGCTTAGCTTCTCTTCTCAGCAAGAGATGCTGTCTCCAATAGGTAGCATGTCAAATACTTCTGGAAACTCTAGTTCAAATGGACCAGTAGTTTCAAAAGCAACACCAAAAGCTATATTAAGGCTGATGGATTCAGATGGATTGACAATCTTCCATGTTAAAAGTCATTTGCAGAAATACAGAATTGCCAAATTCATGCCACAGTCAACTCAAGGGAAATCTGAAAAAAGAACCAATGTAGAGGATGTGCATCTTGATGTCAAAACTGGCTTGCAAATTAAAGAGGCACTTCAGTTGCAGCTAGATATTCAGAGAAAATTACAGTTGAGAATTGAGGAGCAAGGTAAGCAGCTGAAGATGATGTTTGACCAACAGCACAAGACAAGTGATAGTCACTTGATTACTGAGAATAATGATAGACCAAATAGTTCTAAAGATGTTCTGGATTCCATTTCTGAAGGGTCTGAAAATTCCTTGTTTTCATCTAAGATAAGTTAG 1131 0.3811 MNENRIDCVGRIQQSYGLNGDLNSEFGNCSSQCFDMRQASNMGSGGGVEQEPFIIGQTKSSSNSIISRFESPASAFYATEICMGFQQYDSQIGTNSSLMMSQFSKFSDMEFPLYQSPKQNLFMASLANQPPPNFDLSNPLQEMLKSHLNSDQCVGSSEKTSKIPCGDFPGSNFLPIEQHKLFIDDSRSPSIPSKGNQDQIVSCGSFNLPAAQLSFSSQQEMLSPIGSMSNTSGNSSSNGPVVSKATPKAILRLMDSDGLTIFHVKSHLQKYRIAKFMPQSTQGKSEKRTNVEDVHLDVKTGLQIKEALQLQLDIQRKLQLRIEEQGKQLKMMFDQQHKTSDSHLITENNDRPNSSKDVLDSISEGSENSLFSSKIS 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1448 376 MobiDBLite consensus disorder prediction 346 376 - -
Aed8g1448 376 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 243 274 IPR006447 GO:0003677
Aed8g1448 376 Gene3D - 204 277 - -
Aed8g1448 376 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 38 188 - -
Aed8g1448 376 Pfam MYB-CC type transfactor, LHEQLE motif 302 339 IPR025756 -
Aed8g1448 376 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 243 376 IPR044848 GO:0003700
Aed8g1448 376 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 243 376 - -
Aed8g1448 376 SUPERFAMILY Homeodomain-like 243 273 IPR009057 -
Aed8g1448 376 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 38 188 IPR044848 GO:0003700
Aed8g1448 376 MobiDBLite consensus disorder prediction 334 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1448 Aed-Chr8 19222300 19225205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1448 244 358 G2-like Transcription Factor Family AT4G28610 46.715 6.58e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aed8g1448 Myb_CC_LHEQLE 5.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1448 - - gmx:102668541 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1448 8 19222300 19225205 Aed8g1448 8 19222300 19225205 ECH