Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1439 ATGGTTCGCAGCTACTACGTGTTGTTCGCGAATCTCGCTCTCGTTGTCTTCTCGGCAACTTTTGTTTCTCGGTGTCTCGCATTTACGGATCCTCCTGACGTCACAGCTCTGCAGGATCTATACATGGCTTTAAACACCCCACCAGTGCTGAAAGGATGGAACGGTAGTGATCCTTGTGAGGAATCATGGACAGGAGTAGCATGTTCTGGGTCATCAGTTATACACCTCAAAATTCATGGATTAAACCTTACTGGGTTTCTTGGAGGCTTGCTCAACAATCTACAAAACTTGAAGCAACTTGATGTCAGTTCTAACAACATAGTGGGTGAAATACCACAGGGTTTACCCCCGAATGCCACACATATAAATATGGCTTGCAACAATTTGGTCCAAAATATCCCCAGTACATTGTCAACCATGAAAAAACTAAGACATCTAGACCTTTCATACAATAATTTCACTGGTGATCTGCCAAGTTCATTTGGTGCCTTGACAGACCTTAATAGATTGTTCCTGCAGGATAATAGATTCACCGGATCAGTCACTTACCTGTCTGAGCTTCCACTCATTGATTTGAACATTCAAGATAATCTGTTCAGTGGCATTATTCCACAGCATTTTCAGTCCATACCAAACTTATGGATTGGAGGGAACAAGTTCCATGCAGTAGACTCTCCTACGTGGGCATTTCCTTTGGACAATGTGCCCATTGAGCAAAATACTACTGGTCCACCCATAACTCAGGCAAATGCCGTCGAGAACTATGATCATCCTAAAGTAAGGAAACAAAAGAAGAAACGTATGGGACCTGGAGAAATAGCTTTTATGGTTGGTGCAGGAACATTATTGACAACAGGTTTTGCGCTCCTCATTGCCATCCATTTGAATAAGCTCCATAGACAGAGAATGGAGGACCATGAAAGCAACCATAGTTCATTTCTTGCTTATCCAATCACTGCAACCAGAGCAATAGATGAGACTGAGAGCTTGCAAATCCCACCTTACAATGCTTTATCCCTTTTGGGTCCAAGGAGATTAACTTCCCAGATCCATAACAGAACTAGGGAAACAACTAGAAAAAGCTTTTCCGGAAGAGACAGATTCAATGGAAGGACAAAGATTTATACAGTAGCGGAGGTTCAGTTGGTCACAAATAGTTTCCATGAAGACAACCTTCTAGGAGAGGGATCACTTGGCCCTGTTTACAGAGCTGAATTTCCAGATAACAAGGTTTTAGCAGTGAAAAATATTAGCATGGCTGGCATGTCTATAAATGAAGAGGAAAAGTTCTTAGATGTCGTTTGCACCGTTTCCCGTCTGAAGCACCCCAACATTGTTTCACTTAAAGGCTACTGTTTGGAGCACGGACAACATCTTCTTGTCTACGACTATGTCAGAAATTTATCTCTAGATGATGCTCTTCATAGTGCAGCATACAAACCTTTATCGTGGGGCACCCGTCTCAGAATTGCTTTAGGTGTTGGCCAGGCACTGGACTATTTGCACTCAACGTTTTTCCCTCCTGTCGCCCATGGCAACTTAAAGGCTACCAATATTCTACTTGACGAAAATCTTATGCCTCGTGTTACTGACTGTGGCTTGGATATTTTGAGACCACTCTCAAGCGATAAAGTCAAAATTTGGGCTTCTGAGATTGATATTAGAGATACAGGATACAATTCACCTGAGCATGGACAACCAGGAATCGGCAGCACGAAGAGTGATATCTTTTCCTTTGGAGTGTTGCTTCTTGAACTGTTAACAGGAAGAAAACCATTCGATGGTTCGAGGCCAAGGGAAGAGCAGCATCTGGTAAAATGGGCATCATCAAGGCTTCACGACAGCCACAGTTTAGAACAGATGGTGGATGCAGCGATCAAGAGGACGTTTTCGACCAAGGCTCTATCTCGCTATGCTGATATCATCTCCCTCTGCATTCAGCCTACGAAGGAATTTCGACCAGCAATGTCTGAAATGGTGGAGTCTCTTGTGTCTTTCTCTAAGAATCTGGTTTCAACAATAGATGGTGCTGCTGCTGCAGAAATTGGTGCACTTGAGAGGTCTTTTCGCACAACCACCTCACGCTTTATCGGTTCACCCGCAATGAGCTATGTATCTGCCTGA 2124 0.4346 MVRSYYVLFANLALVVFSATFVSRCLAFTDPPDVTALQDLYMALNTPPVLKGWNGSDPCEESWTGVACSGSSVIHLKIHGLNLTGFLGGLLNNLQNLKQLDVSSNNIVGEIPQGLPPNATHINMACNNLVQNIPSTLSTMKKLRHLDLSYNNFTGDLPSSFGALTDLNRLFLQDNRFTGSVTYLSELPLIDLNIQDNLFSGIIPQHFQSIPNLWIGGNKFHAVDSPTWAFPLDNVPIEQNTTGPPITQANAVENYDHPKVRKQKKKRMGPGEIAFMVGAGTLLTTGFALLIAIHLNKLHRQRMEDHESNHSSFLAYPITATRAIDETESLQIPPYNALSLLGPRRLTSQIHNRTRETTRKSFSGRDRFNGRTKIYTVAEVQLVTNSFHEDNLLGEGSLGPVYRAEFPDNKVLAVKNISMAGMSINEEEKFLDVVCTVSRLKHPNIVSLKGYCLEHGQHLLVYDYVRNLSLDDALHSAAYKPLSWGTRLRIALGVGQALDYLHSTFFPPVAHGNLKATNILLDENLMPRVTDCGLDILRPLSSDKVKIWASEIDIRDTGYNSPEHGQPGIGSTKSDIFSFGVLLLELLTGRKPFDGSRPREEQHLVKWASSRLHDSHSLEQMVDAAIKRTFSTKALSRYADIISLCIQPTKEFRPAMSEMVESLVSFSKNLVSTIDGAAAAEIGALERSFRTTTSRFIGSPAMSYVSA 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1439 707 Gene3D Ribonuclease Inhibitor 33 116 IPR032675 -
Aed8g1439 707 SUPERFAMILY L domain-like 46 215 - -
Aed8g1439 707 Gene3D Transferase(Phosphotransferase) domain 1 465 679 - -
Aed8g1439 707 Pfam Protein tyrosine and serine/threonine kinase 390 663 IPR001245 GO:0004672|GO:0006468
Aed8g1439 707 SUPERFAMILY Protein kinase-like (PK-like) 366 663 IPR011009 -
Aed8g1439 707 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 141 670 - -
Aed8g1439 707 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 146 - -
Aed8g1439 707 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 2 ISOFORM X1 141 670 - -
Aed8g1439 707 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 2 ISOFORM X1 12 146 - -
Aed8g1439 707 Coils Coil 707 707 - -
Aed8g1439 707 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Aed8g1439 707 Gene3D Ribonuclease Inhibitor 117 265 IPR032675 -
Aed8g1439 707 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Aed8g1439 707 Gene3D Phosphorylase Kinase; domain 1 346 464 - -
Aed8g1439 707 ProSiteProfiles Protein kinase domain profile. 387 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1439 Aed-Chr8 19139191 19144703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1439 12 707 Strubbelig Receptor Gene Family AT5G06820 51.163 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Aed8g1439 PK_Tyr_Ser-Thr 3.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1439 - - gmx:100816202 1118.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0391 4 2791641 2796223 Aed8g1439 8 19139191 19144703 PCT