Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1434 ATGGTGCTGATGAATTCCGTTCATGCAGAGAACTCATCATCATCAGGAATGAGGCCACCACCAACTCTCAACATTTTCCCATCTCAACCTATGCACGCAGTGCCACCACCCAATTCCAAGGTTAACATGGAATTACTCTCCACACAAACCAACACTGGTGGCTCAAAGAGACAACCAGAGTCATCATCCATGGCCAAACCCAACCCACACATTGCATCTGATCCTCCCAAAGCTCTAAAGGGCAATCGCAAGGGAACAACTTCAAGTTCTGAGCAGGAAGCACCCAAAACGCCAGATCCTAAGACACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCAAGGAAAAGCAGGCTGAGGAAAAAGGCGTACGTTCAGCAACTAGAGTCAAGTAGGATTAAGCTTAATCAGATAGAACAAGAGTTACAACGTGCAAGAGCTCAAGGCATATTAATGGGTGGAAATGTACTTCTGGGAGGGGAGCAAGGTTTTCCCATGGCCATGAGTGGCATTAGCTCAGAGGGCGCAATGTTTGACGCGGAATATGCGAGGTGGTTAGAGGAGCACCACCGCATAGTGTGCGAGCTAAGAGCTGCACTCGAAGAACACATTCATGAAAACGAGCTTCGATTGTATGTGGAGAATTGCTTGGCTCACTATGACCAAGTGATGAGCCTGAAGAGCATAGTGGCCAAAACCGATGTGTTCCACCTTGTTTTTGGCATGTGGAAGACCCCAACTGAACGTTGCTTCATGTGGATTGGTGGCTTCAGGCCATCTGAACTCATCAAGGTACAATAA 798 0.4749 MVLMNSVHAENSSSSGMRPPPTLNIFPSQPMHAVPPPNSKVNMELLSTQTNTGGSKRQPESSSMAKPNPHIASDPPKALKGNRKGTTSSSEQEAPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQIEQELQRARAQGILMGGNVLLGGEQGFPMAMSGISSEGAMFDAEYARWLEEHHRIVCELRAALEEHIHENELRLYVENCLAHYDQVMSLKSIVAKTDVFHLVFGMWKTPTERCFMWIGGFRPSELIKVQ 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1434 265 MobiDBLite consensus disorder prediction 1 104 - -
Aed8g1434 265 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 99 143 IPR004827 GO:0003700|GO:0006355
Aed8g1434 265 PANTHER TRANSCRIPTION FACTOR TGA9 12 264 - -
Aed8g1434 265 ProSiteProfiles DOG1 domain profile. 174 265 IPR025422 GO:0006351|GO:0043565
Aed8g1434 265 Pfam bZIP transcription factor 101 133 IPR004827 GO:0003700|GO:0006355
Aed8g1434 265 MobiDBLite consensus disorder prediction 41 68 - -
Aed8g1434 265 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 12 264 - -
Aed8g1434 265 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 104 119 IPR004827 GO:0003700|GO:0006355
Aed8g1434 265 SUPERFAMILY Leucine zipper domain 101 143 IPR046347 GO:0003700|GO:0006355
Aed8g1434 265 SMART brlzneu 97 150 IPR004827 GO:0003700|GO:0006355
Aed8g1434 265 CDD bZIP_HBP1b-like 101 153 - -
Aed8g1434 265 Gene3D - 100 150 - -
Aed8g1434 265 Coils Coil 120 147 - -
Aed8g1434 265 MobiDBLite consensus disorder prediction 1 22 - -
Aed8g1434 265 Pfam Seed dormancy control 192 264 IPR025422 GO:0006351|GO:0043565
Aed8g1434 265 MobiDBLite consensus disorder prediction 82 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1434 Aed-Chr8 19059975 19062321 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1434 8 264 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 58.955 4.73e-104 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed8g1434 DOG1 4.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1434 K14431 - gmx:100800059 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1434 8 19059975 19062321 Aed8g1434 8 19059975 19062321 ECH
Aed4g0398 4 2858927 2865703 Aed8g1434 8 19059975 19062321 PCT