Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1426 ATGATGATGAACGACATTGAAGGCTACATACCAATATTCCTTGTTTGGCTAGCCTCAATATTACTGCTCCGAGCCATATTCAAAACCTCATCAACACTTCGCCCTCCACCTGGTCCATTTTCCTTACCAATTATTGGGCACTTCCACTTAATAAAACCACCCCTTCACAGATCCCTTCAGAAGCTCTCAAATCGTTATGGATCCTTGATTCACATCTACCTTGGATCCACTCCCATTGTTGTTGTTTCCTCTTCAGAAATAGCCCAAGAGATCTTCAAAACCAATGAACTTTCCTTCTCCAATAGACCAGCAAATGTTGCTATTAGCTATCTCACTTACAACTCATCTGATTTAGGGTTTGCCCCTTATGGACCCTATTGGAAGTTCTTGAAGAAGCTTTGCATGTCAGAGCTTCTCAATGGGAGGATGCTGGATCAGTTCCTACCCATTAGGCAAGAGGAGATAAACAGGTTTGTGCAGATGATGAAAGTGAAAGGTGAAACATGTGAGGAAGTGAATGTTGGAGATGAGTTTTTGAAGCTTACAAATAGCATAGTGATGAGAATGGCAATAGGAAAAAGTTGTTTCATCACTCATGATGAGGCTCACAAGGTGACAGAAAGGGTCAAAGAGTCTTCCAAGGTGAGTGGAATGTTTAACCTAGAAGATTACTTTTGGTTCTGTAGGGGGTTGGATTTACAGGGAATTAGGAAGAAGATGAAGGTGGTTCGTGAGAAGTTTGATTCCATGATGGAGTGTATCATTCAGGAACATGAAGAGGCAAGAAATAAGAATAATTCATCTGATGAAAAGGATGCTCCAAAAGATGTTCTTGATGCCCTTTTGAGTATTTATGAAGATCAAAGCTCAAAGGTGAAGATAACCAGAGACAACATTAAAGCCTTCTTGGCGAAAGCAAGGAAAGAGATTGACTCCATCATCATTGGCAACAAGGATCACAGAATAGTAACAGAATTAGACATAGACAATCTTCCTTATCTCCAAGCCATAGTGAAGGAAACACTGAGGCTTCACCCTCCATCCCCATTTGTATTGAGAGAGTCAACAAAAAATTGCACCATTGGAGGATATGACATTCCAGCAAAGACTCAGGTTTTCACTAATGTGTGGGCCATTGGAAGGGATCCAAAGCAATGGGAGGACCCTCTTGAGTTTAGGCCTGAAAGGTTTCTAATTAGCAATAATAATGAGAGTGAAAAAATAGGTCAAGTTGATGTTAGGGGACAACATTATCAAGTTTTACCTTTTGGGAGTGGAAGAAGAGGGTGTCCTGGGGTTTCACTGGCACTCAAGGTTGTTCATACCACACTTGCTGCTATGATTCAATGCTTTGAATGGAAGGGTGATGAAGAAGATGGAGGGAATTGTGGTAGGGTTGATATGAAAGAGGGACCTTCATTGATTCTTTCAAGAGCCAAACCTTTTATTTGTGTCCCAAAACCAAGACTCATGTCATTCCCTTTGTCATGCTAA 1494 0.4103 MMMNDIEGYIPIFLVWLASILLLRAIFKTSSTLRPPPGPFSLPIIGHFHLIKPPLHRSLQKLSNRYGSLIHIYLGSTPIVVVSSSEIAQEIFKTNELSFSNRPANVAISYLTYNSSDLGFAPYGPYWKFLKKLCMSELLNGRMLDQFLPIRQEEINRFVQMMKVKGETCEEVNVGDEFLKLTNSIVMRMAIGKSCFITHDEAHKVTERVKESSKVSGMFNLEDYFWFCRGLDLQGIRKKMKVVREKFDSMMECIIQEHEEARNKNNSSDEKDAPKDVLDALLSIYEDQSSKVKITRDNIKAFLAKARKEIDSIIIGNKDHRIVTELDIDNLPYLQAIVKETLRLHPPSPFVLRESTKNCTIGGYDIPAKTQVFTNVWAIGRDPKQWEDPLEFRPERFLISNNNESEKIGQVDVRGQHYQVLPFGSGRRGCPGVSLALKVVHTTLAAMIQCFEWKGDEEDGGNCGRVDMKEGPSLILSRAKPFICVPKPRLMSFPLSC 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1426 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 423 432 IPR017972 GO:0005506|GO:0016705
Aed8g1426 497 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 303 493 - -
Aed8g1426 497 SUPERFAMILY Cytochrome P450 36 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed8g1426 497 PANTHER CYTOCHROME P450 93A2 7 303 - -
Aed8g1426 497 Coils Coil 251 271 - -
Aed8g1426 497 Gene3D Cytochrome P450 303 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed8g1426 497 PRINTS P450 superfamily signature 430 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed8g1426 497 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed8g1426 497 PRINTS P450 superfamily signature 421 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed8g1426 497 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed8g1426 497 PRINTS E-class P450 group I signature 420 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed8g1426 497 PRINTS E-class P450 group I signature 430 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed8g1426 497 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed8g1426 497 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed8g1426 497 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed8g1426 497 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 303 - -
Aed8g1426 497 PANTHER CYTOCHROME P450 93A2 303 493 - -
Aed8g1426 497 Pfam Cytochrome P450 36 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed8g1426 497 Pfam Cytochrome P450 304 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed8g1426 497 Gene3D Cytochrome P450 27 302 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1426 Aed-Chr8 18889462 18893169 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1426 3 495 Cytochrome P450 AT5G06900 42.315 5.83e-139 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1426 K24188 - gmx:100811919 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1426 8 18889462 18893169 Aed8g1426 8 18889462 18893169 ECH
Aed4g0405 4 2890650 2892761 Aed8g1426 8 18889462 18893169 PCT