Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1415 ATGCCACGTCATCACCGCCACCATCTCCACATCCACCTCTTATTCTTCTTCTTCTTCTTCCTCCTTTCTCTTCCGCTGCTGACCGTACTCTCCCTAAACTCCGACGGCCTCTCCTTGCTAGCCTTGAAGGCCGCAATGACACTTGACCCCACAGGCGCCCTATCCACCTGGTCACCCGCCTCTCTTACCCCCTGCACCTGGTCCGGCATAGCCTGCAACAAACACAACAACTTCGTAACCCAAATAAACCTCACTTCAAAGTCCCTAACCGGCTATCTCCCCTCCCAACTCGGCCTCTTAACCCACCTAAAGCGCCTCGACCTCTCCCACAACGCCCTCACGGGCCCACTCCCTGAAACACTCTCCTCTCTCACACGCCTCGTCCACTTAGACCTCTCCTCGAACCTCCTCTCCGGTCCCATTCCGGTCACCCTCTCGTCCCTCCCCTCCCTCGCGGGAACGCTCAACCTCTCTCATAACCGCTTCACCGGCAACATCCCGTCCTCCCTCGGTTCCCTCCCGGTCACCGTCAGCCTCGACGTCCGTTACAATAACTTGAGCGGCGAAATCCCCCGAGTCGGGGCTTTGCTCAACCAGGGTCCCACTGCTTTCTCCAACAACCCCTACCTCTGCGGCTTTCCCTTGCGAAACACGTGTTCCGAAGATCCGAAGCTCCCGACTCCGAACCGGAACTTGACAGGGGAGGAGGAGGAGCGGAATGTTGCGAGAGGTGGTGGTGGGCTTTTCGTGTGCGTGGTTGCCGTGGTGGTGATATCTGGAGTTTTGTTATGCTTCGCGGTGGTTTTTTTGTTGCTGCGGCGAGGGAAGGGGGAAGAGTGTGTGGACGAAAAGGGGAGGTTTGTGGTGGTGGATGATGAGGGGGAGGAGGAGGGAAGGGTGATGGAGTTGGAGTTGGAAGATTTGTTGAGGGGCTCGGCGTATGTTGTGGGGAAGAGTAGGAGTGGGATTGTGTACAAGGTTGTCGGGGTTGGGAAATGCGGTGCCGCGGGGAGGGTGGTGGCGGTGAGGAGGCTCGGCGAGGGAGCTGCGGCGTGGCGGATGAAGGAGTTTGAGGCGGAGGTGGAGGGTGTGGCGAGGGTGAGGCACCCCAATGTAGTGCCTCTCAGAGCGTATTACTATGCCAGGGAGGAGAAGCTGCTCGTCACGGATTTCGTCCGCAATGGGAACTTGCACACGGCATTACATCATGGAAAGTCACATATATACCACTCATTATTAGTGGACGTTGTTGATAGTCACCGTGTGATTGTCTCCATTATGGCATTGAACGTGTGGGCCGTCCAATTCATTTTCACCACTACCATGGGCATCAAGGTACGCATAGCTGGTGGAAAGTTCACTCAGAAATGTGATGTGTATTCTTTTGGTATAGTGCTATTAGAGCTTTTGACAGGTAGGGTTCCAGATTTATTAGGAGCTGAAAATGAAAATGAAAATGATGATGATGGCATGGAGCTAGAGTGTTTTGTGAGGAAAGCATTCAGGGAGGAACGACCCTTGTCAGAAATTATAGACCCTACACTTCTGCCTGAGGTTTATGCTAAAAACCAAGTTGTTGCAGTGTTTCATGTTGCACTAAACTGCACAGAACATGATCCAGAATTGCGACCACTAATGAGAATCGTGTCCGAGACCCTTGATCAAATCAAAACACAGTGA 1680 0.5363 MPRHHRHHLHIHLLFFFFFFLLSLPLLTVLSLNSDGLSLLALKAAMTLDPTGALSTWSPASLTPCTWSGIACNKHNNFVTQINLTSKSLTGYLPSQLGLLTHLKRLDLSHNALTGPLPETLSSLTRLVHLDLSSNLLSGPIPVTLSSLPSLAGTLNLSHNRFTGNIPSSLGSLPVTVSLDVRYNNLSGEIPRVGALLNQGPTAFSNNPYLCGFPLRNTCSEDPKLPTPNRNLTGEEEERNVARGGGGLFVCVVAVVVISGVLLCFAVVFLLLRRGKGEECVDEKGRFVVVDDEGEEEGRVMELELEDLLRGSAYVVGKSRSGIVYKVVGVGKCGAAGRVVAVRRLGEGAAAWRMKEFEAEVEGVARVRHPNVVPLRAYYYAREEKLLVTDFVRNGNLHTALHHGKSHIYHSLLVDVVDSHRVIVSIMALNVWAVQFIFTTTMGIKVRIAGGKFTQKCDVYSFGIVLLELLTGRVPDLLGAENENENDDDGMELECFVRKAFREERPLSEIIDPTLLPEVYAKNQVVAVFHVALNCTEHDPELRPLMRIVSETLDQIKTQ 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1415 559 Gene3D Phosphorylase Kinase; domain 1 300 391 - -
Aed8g1415 559 SUPERFAMILY L domain-like 37 216 - -
Aed8g1415 559 Pfam Leucine rich repeat N-terminal domain 33 73 IPR013210 -
Aed8g1415 559 SUPERFAMILY Protein kinase-like (PK-like) 315 554 IPR011009 -
Aed8g1415 559 Gene3D Transferase(Phosphotransferase) domain 1 426 559 - -
Aed8g1415 559 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 445 559 - -
Aed8g1415 559 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 410 - -
Aed8g1415 559 PRINTS Leucine-rich repeat signature 124 137 - -
Aed8g1415 559 PRINTS Leucine-rich repeat signature 103 116 - -
Aed8g1415 559 ProSiteProfiles Protein kinase domain profile. 310 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1415 559 Gene3D Ribonuclease Inhibitor 24 221 IPR032675 -
Aed8g1415 559 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 10 410 - -
Aed8g1415 559 Pfam Protein tyrosine and serine/threonine kinase 316 414 IPR001245 GO:0004672|GO:0006468
Aed8g1415 559 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 445 559 - -
Aed8g1415 559 Pfam Leucine rich repeat 80 137 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1415 Aed-Chr8 18733293 18737270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1415 32 559 Receptor kinase-like Gene Family AT3G57830 39.357 6.48e-137 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed8g1415 PK_Tyr_Ser-Thr 6.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1415 - - gmx:100806058 493.426