Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1404 ATGGAAAGTGTTAGTTCCAACGGATGGCAAAGATCTCGCAAGTCAACTTCAATGCAGAGAAAGAAATGTCTAATTAGGAAAATCTCTGAATTTTCCAAAATGTTTGGAGTTGAAGCATGTTTGATTGATGATGACGAGGATGTTGGACCTGTGACATGGCCTAAGGACCCCACATCGGTGCACTCCACTATTCATAAGTGTCATGTGAGGCCTCGAGAAGAAACTTTTGATATTGAAGACTTTTTCAAGAATAGGAACAACAGTGTTGAGGTGAGATTTCCAAGGTGTAGAAACAAATAG 300 0.4 MESVSSNGWQRSRKSTSMQRKKCLIRKISEFSKMFGVEACLIDDDEDVGPVTWPKDPTSVHSTIHKCHVRPREETFDIEDFFKNRNNSVEVRFPRCRNK 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1404 99 Gene3D - 10 89 IPR036879 GO:0003677|GO:0046983
Aed8g1404 99 SUPERFAMILY SRF-like 10 68 IPR036879 GO:0003677|GO:0046983
Aed8g1404 99 PANTHER PROTEIN, PUTATIVE-RELATED 10 90 - -
Aed8g1404 99 PANTHER MADS BOX PROTEIN 10 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1404 Aed-Chr8 18530380 18531875 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1404 10 90 Type I MADS-box Gene Family AT5G55690 29.670 2.76e-07 45.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Aed8g1404 SRF-TF 2.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1404 - - gmx:100806649 90.5077