Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1399 ATGGAGTCTCACGATGAAACAGGATGCCAGGCTCTGGAACGGCCCATACTCTGCGTTAACAATTGTGGCTTCTTTGGACGGGCTGCTACCATGAATATGTGTTCCAAATGTTACAAAGACATGCTGTTGAAGCAGGAACAAGACAAACTTGCAGCAGCATCGGTTGAAAACATTGTGAATGGCGGCGGTTCTGGCTGCAATGGGAAACAGGCTGTGACTGCAGGTTCTGTGGATGTACAAGTTGGAAATGTGGAGGTCAAGACGGTCCGTGTTGAGGTTTCTGGCGATTCATCCTCTGGTGAGAATTTGGAGATGAAAGCTAAGACAGGTCCCAGCAGATGTGCTACTTGCCGAAAGCGTGTTGGATTAACAGGTTTCAGCTGCAAATGTGGTAAACTCTTTTGTGCAATGCACCGCTATTCCGACAAACATGATTGCTCCTTTGATTATCAGACTCTTGGTCGGGATGCTATTGCTAAAGCCAACCCCATAATTAAGGCTGATAAGATCGACAAAATCTAG 522 0.4655 MESHDETGCQALERPILCVNNCGFFGRAATMNMCSKCYKDMLLKQEQDKLAAASVENIVNGGGSGCNGKQAVTAGSVDVQVGNVEVKTVRVEVSGDSSSGENLEMKAKTGPSRCATCRKRVGLTGFSCKCGKLFCAMHRYSDKHDCSFDYQTLGRDAIAKANPIIKADKIDKI 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1399 173 Gene3D - 92 169 IPR035896 -
Aed8g1399 173 SMART AN1_Zf_4 114 151 IPR000058 GO:0008270
Aed8g1399 173 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 173 - -
Aed8g1399 173 SUPERFAMILY AN1-like Zinc finger 105 168 IPR035896 -
Aed8g1399 173 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
Aed8g1399 173 Pfam AN1-like Zinc finger 114 151 IPR000058 GO:0008270
Aed8g1399 173 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Aed8g1399 173 ProSiteProfiles Zinc finger AN1-type profile. 108 154 IPR000058 GO:0008270
Aed8g1399 173 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Aed8g1399 173 Gene3D - 1 59 - -
Aed8g1399 173 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8 2 173 - -
Aed8g1399 173 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1399 Aed-Chr8 18354805 18355326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1399 5 173 C2H2 Transcription Factor Family AT3G52800 42.604 5.23e-40 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1399 - - gmx:100499995 297.36